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The Cochrane Library

                        A Training Guide



Ron Hudson
Outreach Training Librarian
Croydon Health Library and Resources Service
NHS Croydon
12-18 Lennard Road
Croydon CR9 2RS
Tel: 020 8274 6316
Mob: 07733 300 104
Email: ron.hudson@croydonpct.nhs.uk

July 2010

With thanks to Mary Last, Clinical Support Librarian, Bloomsbury Healthcare Library
Contents



1.   Overview - sources of research-based evidence
         Sources of research-based evidence ............................................................. 3
         The hierarchy of evidence ............................................................................... 4

2.   Introduction to the Cochrane Library
          What is the Cochrane Library? ........................................................................ 5
          When to use the Cochrane Library.................................................................. 5
          Background and history of the Cochrane Library ............................................ 6
          The databases ................................................................................................ 7
          Definitions ……………………………………………………………………………9

3.   Getting started
          Accessing the Cochrane Library.................................................................... 10
          Site registration and password ..................................................................... 10
          Explaining the home page ............................................................................ 12

4.   Browsing the Cochrane Library
         Browsing the main databases ...................................................................... 13
         Cochrane Database of Systematic Reviews Symbols ..……………………….14
         Browsing the Cochrane Database of Systematic Reviews ............................ 15
            Browsing by Topic.................................................................................... 15
            Browsing by Review Group ..................................................................... 15

5.   Searching the Cochrane Library
         Search tips and tricks ................................................................................... 17
         Simple search ............................................................................................... 19
         Advanced search .......................................................................................... 20
         Search history .............................................................................................. 22
         Searching MeSH .......................................................................................... 24

6.   Viewing, printing and saving search results
         Viewing search results .................................................................................. 27
            Different sections of a Cochrane Systematic Review ……………………29
            Following up on primary references………………………………………….30
            Interpreting graphs ................................................................................... 30
         Saving and printing search results ................................................................ 31
         Saving a search............................................................................................. 32
         Saving a search strategy ............................................................................... 33
         Setting alerts ................................................................................................ 35




                                                           2
Overview - sources of research-based evidence

Evidence-based practice has been described as:

     … the conscientious, explicit, and judicious use of current best evidence in making
     decisions about the care of individual patients. The practice of evidence based
     medicine means integrating individual clinical expertise with the best available
     external clinical evidence from systematic research.

     Sackett DL et al. BMJ, 1996, Vol 312, pp 71-72

The range of the ‘external clinical evidence’ available to health care professionals is
often described as a hierarchy and this is shown on the following page, from individual
opinion at the bottom of the pyramid, through research methodologies of varying rigour.
You can access most of this enormous quantity of research-based evidence through the
primary journal literature by searching databases search as Medline.

There are, however, specialist resources that you can go to which evaluate and
summarise available research evidence when you want to know about the effectiveness
of a particular health care intervention. These can be divided into:

•    Reviews
     eg Cochrane Database of Systematic Reviews

     Reviews are examples of secondary research. Standard reviews compare the results
     of two or more primary studies. The systematic review, however, aims to give a full
     picture of a topic by identifying all available evidence, appraising it and then
     presenting a cumulative summary. This usually includes a meta-analysis, the
     combination of results from primary studies into a single statistical result. More
     information about systematic reviews can be found on page 9.

•    Digests
     eg Clinical Evidence

     Digests identify the major evidence on particular topics and provide key messages.

•    Guidelines
     eg NeLH Guidelines Finder

     Guidelines provide recommendations for effective practice based on current
     evidence.



If you find a systematic review or summary of current evidence which answers your
question you will be saved the work of searching databases for journal literature as well
as much of the reading and critical appraisal involved.




                                             3
The Hierarchy of Evidence


                                                                    BEST

A systematic review of at least two randomized controlled trials


A randomized, controlled trial


A cohort study


A case-control study


An uncontrolled study with dramatic results


An expert committee report or similar


Anecdotal evidence

                                                                    WORST




Harrison S. (ed) Evidence-based medicine: its relevance and application to primary care
commissioning. London: Royal Society of Medicine Press Ltd, 1998.




                                              4
Introduction to the Cochrane Library


What is the Cochrane Library?

The Cochrane Library is described as the best single source of reliable information on
the effects of interventions in health care. It is designed to provide information and
evidence to support decisions taken in health care and to inform those receiving care.

The Cochrane Library is a collection of databases containing systematic reviews, health
technology assessments, economic evaluations and controlled trials. More information
about each database can be found on page 7. Some databases provide full-text articles,
some just bibliographic details with abstracts.


When to use the Cochrane Library
The whole of the Cochrane Library is concerned with the effectiveness of interventions
for a given health care problem or in a particular health care situation.

The Cochrane Library is useful for answering the following types of queries:

   •   What is the effectiveness of treatment X in condition Y?
       What is the effectiveness of aspirin in vascular dementia?

   •   Is treatment A better than treatment B?
       Is there any evidence that clozapine is more effective in the treatment of
       schizophrenia than standard antipsychotics?

   •   What is an effective intervention to achieve outcome Z?
       What are the most effective strategies for stopping smoking?

The Cochrane Library is not useful for these types of questions:

   •   General health care information
       Are there any new drugs for manic depression?

   •   Statistical information
       What is the teenage pregnancy rate?

   •   Cause, prognosis, epidemiology or risk factors for an illness
       What are the health effects of unemployment?

   •   Guidelines

   •   Current research (apart from systematic reviews and randomised controlled
       trials)




                                             5
Background and history of the Cochrane Library
Since 1996, systematic reviews prepared and maintained by the Cochrane Collaboration
have been published in The Cochrane Library, along with bibliographic and quality-
assessed material on the effects of health care interventions submitted by others.
Cochrane reviews are a highly regarded source of evidence about the effects of health
care interventions and widely thought of as being of better quality, on average, than their
counterparts in print journals.


The first issue of the Cochrane Library in 1996 therefore incorporated:

•   Regularly-updated systematic reviews and protocols for reviews in preparation
•   Quality appraisals of reviews published elsewhere
•   A register of controlled trials

These collections were viewed as part of a hierarchy of evidence, ranging from regularly
updated reviews, to high-quality reviews published elsewhere, to reports of individual
controlled trials.
There are now six main databases plus one other giving information about the Cochrane
Collaboration and its Review Groups. Further information on each of the main
databases can be found below.

Further information

The Cochrane Collaboration's web site - www.cochrane.org/ - is a useful source of
information. The Newcomer's Guide on it provides background information on the
Cochrane Collaboration and its systematic reviews.

An article about the genesis and history of the Cochrane Library between 1988 and 2003
can be found at www.update-software.com/history/clibhist.htm.




                                             6
The Databases
Cochrane Database of Systematic Reviews (CDSR; Cochrane Reviews)
A systematic review identifies an intervention for a specific disease or other problem in
health care, and determines whether or not this intervention works. To do this authors
locate, appraise and synthesise evidence from as many relevant scientific studies as
possible. They summarise conclusions about effectiveness, and provide a unique
collation of the known evidence on a given topic, so that others can easily review the
primary studies for any intervention.

As of Issue 4, 2008, this database also includes systematic reviews of diagnostic test
accuracy. Cochrane diagnostic test accuracy reviews are not based on randomized
controlled trials, but mainly on cross sectional studies.


From Issue 2, 2007, this database also includes the methodology reviews that were
previously part of Cochrane Database of Methodology Reviews (CDMR; Methods
Reviews)

Cochrane Methodology Reviews are full-text systematic reviews of methodological
studies. Highly structured and systematic, evidence from methodological research is
included or excluded on the basis of explicit quality criteria, thus minimising bias. Each
review covers a specific and well-defined area of methodology. Data from studies are
often combined statistically to increase the power of the findings of numerous studies,
which on their own may be too small to produce reliable results. In such cases, the
review may also include graphs presenting the data from each individual study.
Protocols provide information about reviews which are currently being written. They
summarise the background and the rationale of the review.


Database of Abstracts of Reviews of Effects (DARE; Other Reviews)
DARE includes structured abstracts of systematic reviews from around the world which
have been evaluated by the reviewers at the NHS Centre for Reviews and Dissemination
(NHS CRD) at the University of York. Only reviews that meet minimum quality criteria
are included in DARE. These reviews cover topics that have yet to be addressed by a
Cochrane review.

Cochrane Central Register of Controlled Trials (CENTRAL; Clinical Trials)
CENTRAL includes details of published articles taken from bibliographic databases
(notably Medline and Embase), and other published and unpublished sources.
CENTRAL records include the title of the article, information on where it was published
(bibliographic details) and, in many cases, a summary of the article. They do not contain
the full text of the article.

Trials are identified from multiple sources, including searches of bibliographic databases,
hand searches of many hundreds of journals and conference proceedings, and searches
of other trial registers.




                                             7
Cochrane Methodology Register (CMR; Methods Studies)
This is a bibliography of publications which report on methods used in the conduct of
controlled trials. It includes journal articles, books, and conference proceedings. These
articles are taken from the Medline database and from hand searches. The database
contains studies of methods used in reviews and in more general methodological studies
which could be relevant to anyone preparing a systematic review. CMR does not contain
the full text of articles.

Health Technology Assessment Database (HTA; Technology Assessments)
This database contains information on healthcare technology assessments (defined as
prevention and rehabilitation, vaccines, pharmaceuticals and devices, medical and
surgical procedures and the systems within which health is protected and maintained).
The database contains details of ongoing projects and completed publications from
health technology assessment organisations. HTA records follow a standard structure.
Some records contain the title of the project, with the name of the centre responsible and
an indication of where further details can be obtained. Other records contain publication
details, with structured abstracts where available. Records do not, in either case, contain
the full text of the report.

NHS Economic Evaluation Database (NHS EED; Economic Evaluations)
This database contains structured abstracts of articles describing economic evaluations
of health care interventions. The articles are identified by searching through key medical
journals, bibliographic databases and less widely available literature. A paper will be
included if it provides a comparison of treatments and examines both the costs and
outcomes of the alternatives. The database also includes bibliographic details of articles
examining relevant topics, (for example the burden of illness, economic methodology
papers, and reviews of economic evaluations), and short abstracts of studies originally
included in the Department of Health Register of Cost-Effective Studies. Records do not
contain the full text of the original article.




                                             8
Definitions

Systematic Review:

Systematic reviews differ from other types of review in that they adhere to a strict design
in order to make them more comprehensive, thus minimising the chance of bias, and
ensuring their reliability. Rather than reflecting the views of the authors, or being based
on a partial selection of the literature, (as is the case with many articles and reviews that
are not explicitly systematic), they contain all known references to trials on a particular
intervention and a comprehensive summary of the available evidence. The reviews are
therefore also valuable sources of information for those receiving care, as well as for
decision makers and researchers.




Economic Evaluation:

Full economic evaluations, as defined by the NHS CRD, can be one of the following:

•   a cost-benefit analysis (CBA), which measures both costs and benefits in monetary
    values and calculates net monetary gains or losses (presented as a cost-benefit
    ratio);
•   a cost-effectiveness analysis (CEA), which compares interventions with a common
    outcome (such as blood pressure level) to discover which produces the maximum
    outcome for the same input of resources in a given population;
•   a cost-utility analysis (CUA), which measures the benefits of alternative treatments or
    types of care by using clearly defined utility measures (such as quality-adjusted life
    years)




                                              9
Getting started

  Accessing the Cochrane Library
  You can either go directly to the Cochrane Library at www.thecochranelibrary.com or
  from the following link:

  •    National Library for Health (under Evidence Based Reviews) – www.library.nhs.uk

  The databases are updated monthly. Also on the National Library for Health site under
  Evidence Based Reviews you will find links to DARE and NHS EED which represent the
  most up to date versions of these databases. They can be searched individually.



  Site registration and password
  You do not need a password to access the Cochrane Library or to conduct one-off
  searches, view full records or to print or to save them, but if you are likely to be a regular
  visitor to Cochrane and would like to be able to save searches and search strategies and
  to set up email alerts, you should register yourself on the Wiley InterScience site.

  NB You cannot use your Athens username and password to log on to the site.




                                                                             1



                                                                         2




      1. Click ACCESS in the right centre of the screen

      2. Click Register for Wiley Interscience




  •    Fill in the registration form

       Your email address and the password you choose will be used as your username
       and password for the future. Try to register using your work email address and to
       avoid an email address ending in .com. You must also check the box to indicate that
       you have read the Terms of Usage. The information you enter will not be used by a
       third party.

                                                10
•       Click Submit Registration

    You will receive an email confirming receipt of your completed registration form. You
    must validate your account by clicking on the link in the message within 24 hours
    otherwise you may have to register all over again.

    To get back to the Cochrane Library:

        3. Type Cochrane in the search box
        4. Check the radio button Publication Titles
        5. Click Go




                                                                 6


                                       4

3
                                                   5


        •    Then select the current issue of the Cochrane Library from the list of results

    You will now be back at the Cochrane Library home page.

    Logging on subsequently

        •    The next time you access the Cochrane Library and click Log In you are taken to
             the main Wiley InterScience home page to enter your username and password. It
             is not recommended to check the box Remember Me if you share your computer
             with others.

    Once you have logged on you will still be on the Wiley page so will need to get back to
    the Cochrane Library in the way described above.

    Timing out

    You will find that after periods of inactivity during a search session you will be timed out
    and asked to re-enter your username and password. You will be taken back to where
    you were in your search and not lose anything.

    6. Always remember to Log Out when you have finished a search session.




                                                       11
Explaining the home page                                   Find out more about
                                                            the Cochrane
                                                            Collaboration
                          Return to
                          the home
                          page




                                                                 Click here to log
                                                                 in if you have
                                                                 registered for a
Enter your                                                       username
search term




                                                       Links enabling you
                                                       to browse the
                                                       resources on the
                                                       Cochrane Library


 There are different ways of accessing the Cochrane Database of Systematic Reviews.
 You can view them:

 By Topic – Select a topic of interest and narrow it down

 New Reviews – Protocols and Reviews added to the database in the latest
              update

 Updated Reviews – Only those Reviews which have been recently updated

 A-Z – List of Reviews by title (warning, there are over 5,000 titles in
                                   alphabetical order)

 By Review Group – Reviews and Protocols by one of the 51 specific Review
                   Groups
                            e.g. Cochrane Drugs and Alcohol Group




                                              12
Browsing the Cochrane Library

    Four of the six main databases can be browsed, alphabetically by title, by clicking on
    their name. Where necessary use the A-Z links and scroll bar to navigate the lists of
    titles presented.

    The exception is CENTRAL. Because it is so large it is not practical to browse.
    Choosing to browse this database will take you to an advanced search screen where you
    can restrict your search to CENTRAL alone. See page 20 for Advanced Searching.

    This is the A-Z browse screen for the Cochrane Database of Systematic Reviews:




                                                      2
1




    1. The A-Z navigation tool

    2. This allows various portions of the database to be displayed. The default will be all
       records but some of the databases will allow you to choose subsets of records.
       These options carry over to when you are viewing search results (see page 27).




                                                13
Cochrane Database of Systematic Reviews Symbols


On the Cochrane Database of Systematic Reviews you may also find the following
symbols after records, which have been changed with Issue 2, 2008:


                        A full review, complete with results and discussion, meta-
                        analysis and an odds-ratio diagram

                        This is an outline of a review in preparation, including
                        background, rationale and methods

                        A full-text systematic review of methodological studies

                        A full-text systematic review of studies assessing accuracy
                        of diagnostic tests

                        A new review or protocol that has been published in the
                        most recent quarter

                        A new search for studies and content updated (no change
                        to conclusions)

                        A new search for studies and content updated
                        (conclusions changed)

                        There has been an important change to the conclusions of
                        the review as published in the most recent quarter

                        The protocol has been amended to reflect a change in
                        scope as published in the most recent quarter

                        The review or protocol has been withdrawn, which may be
                        because it was considered to be out of date. Reasons for
                        withdrawal are specified in the article

                        The review includes comments. Readers can submit
                        comments which are incorporated into the review together
                        with answers and feedback from the review authors




                                          14
Browsing the Cochrane Database of Systematic Reviews
The Cochrane Database of Systematic Reviews can be browsed by topic, new or
updated reviews, A-Z or by Cochrane Review Group.

Browsing by topic

Use the drop-down list to browse review topics by your chosen Cochrane Collaborative
Review Group.

Selecting a review group shows the broad topic areas which that group covers. Clicking
on a heading opens out further sub-sections until you find a review of interest.




                                                                              Click
                        Select your                                           here to
                        chosen Cochrane                                       see a
                        Collaborative                                         complete
                        Review Group                                          review




Browsing by review group

This brings up a list of the same review groups as searching by topic. But this time when
you select the name of the review group you are interested in you are presented with a
complete list of reviews for that group. This are split into protocols and reviews,
arranged alphabetically within each section.




                                           15
Searching the Cochrane Library

There are four ways of searching the Cochrane Library:

1. Simple search (see page 19)

   Using the single search box on the home page is fine if you want to do a very quick,
   one off search on a topic but you will not be able to build up a detailed or refined
   search strategy.

2. Advanced search (see page 20)

   Advanced search allows you to enter several search concepts in up to five search
   boxes at one time. However we have found problems with this method and do not
   recommend it.

3. Search history (see page 22)

   Conducting searches from within search history allows you to build up detailed
   search strategies by combining search statements together from a single screen.
   Any searches you perform, no matter which method of searching you have used, will
   be stored under search history for the duration of your current search session.

4. MeSH search (see page 24)

   This is a specific method of searching using the index terms assigned to many of the
   records in the Cochrane Library. It is best used in conjunction with free text
   searching carried out within search history.




                                           16
Search tips and tricks
Unless you are searching using MeSH you will be entering your search terms in free-text
format. There are number of rules which will help you get the best out of the databases.

Combining terms        The Cochrane Library supports the use of AND and OR to
using AND or OR        connect search concepts together, eg

                        •   postnatal and depression
                        •   cancer or neoplasm

                       Hints:

                            Just as when you use a search engine such as Google,
                            typing in two or more words will automatically "AND" them
                            together, so the AND can be omitted, eg

                            •   postnatal depression

                            Similarly, OR can be replaced by a comma, eg

                            •   cancer, neoplasm

Phrase searching       If you want two words to be adjacent to each other the phrase
                       must be enclosed in quotation marks, eg

                       •    "postnatal depression"

Proximity connector Using the connector NEAR between words or phrases means
                    that they will appear within 6 or 7 words of each other (excluding
                    stop words), in any order, eg

                       •    postnatal near depression

                       You can change how many words are between them, eg

                       •    postnatal near/3 depression

Spelling tips          Most plurals are automatically searched for, eg

                       •    foot would also find feet

                       If you don't want to find the plural, type in the singular form in
                       quotation marks, eg

                       •    "foot"

                       Common spelling variations are also automatically searched, eg

                       •    randomise or randomize



                                            17
Wildcard/truncation   The wildcard character is the asterisk *. It can be used at the
                      beginning, end or in the middle of words.

                      At the end of a word it acts as a truncation symbol to indicate
                      other letters that might appear after a word stem, eg

                      •   diabet* would find diabetic or diabetes

                      Hint:

                          If you would only find the plural form of a word using
                          truncation there is no need as plurals are found automatically
                          (see above)

                      At the beginning of a word, eg

                      •   *natal would find prenatal or antenatal or postnatal


                      In the middle of the words to pick up variations, eg

                      •   hyp*tension would find both hypertension and
                          hypotension

                      Hint:

                          Although common spelling variations should be found for you
                          (see above), if you want to be sure that you have captured all
                          possible spelling variants, use the wildcard character, eg

                      •   h*ematology would find haematology or hematology

                      The wildcard character should also be used to replace potentially
                      accented letters within words, eg

                      •   “m*ni*re's disease” to find ménière's disease

Punctuation           Hyphens are treated as spaces, so hyphenated and
                      unhyphenated forms of words will be searched for
                      simultaneously

                      •   eg “body weight” will also find “body-weight’’

                      Other punctation, such as the apostrophe, are recognised, but
                      can equally be left out, eg either St John's wort or St Johns
                      wort both work fine




                                          18
Simple search




                                                                      2
                              1


You can therefore conduct simple searches using the above search tips in the single
search box on the Cochrane Library front page:

1. Key in your search terms and click Go

2. As a default the Title, Abstract and Keywords fields are searched, but you can also
assign your search to other fields of the database, eg just the record title. For more
information about the various database fields see page 20.



 Hint
 If you use simple search for a search containing several search terms, including
 synonyms, be sure to use brackets around terms to ensure that the search you want
 runs smoothly. For example:

 •   ("otitis media with effusion" or "glue ear") and antibiotic and child*

 It is vital to put brackets around the two synonymous terms to ensure that they are
 OR'ed together. With complex databases such as the Cochrane Library, AND
 commands will always run first within a search string, so without the brackets the
 search would in effect be:

 •   "otitis media with effusion" or ("glue ear" and antibiotic and child*)




                                              19
Advanced Search
Advanced search allows you to enter several search concepts in up to five search boxes
at one time. However there are problems with this method and using Search History is
recommended in preference (see page 22).

•   Click on Cochrane Advanced Search below the single search box on the home
    page

You will see five interconnected search boxes and various options for restricting your
search.




Database fields

All text            Your term in any field of all the databases. For CDSR this will be
                    the full text of the systematic review.
Record title        Article titles only
Author              Authors of articles only
Abstract            Abstracts only
Keywords            Your term in the Index field in all databases except "About" which
                    don’t have an index field. All of the databases except CMR use
                    MeSH as their index terms. CMR uses its own index terms called
                    CMR words. CDSR, CENTRAL and NHS EED additionally use
                    MeSH check words.
Title, Abstract     Your term in any of the fields, title, abstract or keyword.
or Keywords

                                            20
Tables                 Your term in the Table field. Tables only appear in the CDSR
                       database.
Publication type       Searches the Publication field in CENTRAL only. The following
                       possible terms used are: clinical trial; journal article; multicenter
                       study; randomized controlled trial; controlled clinical trial.
Source                 Searches the title field or the field which details the source of the
                       original article referenced in the database.
DOI                    A search for the DOI number in the DOA field of CDSR. (DOI
                       means Digital Object Identifier see www.doi.org/faq.html#1)

Restrictions and limits

You can also choose to:

•    Restrict your search to particular databases within the Cochrane Library
•    Select just new, updated, commented or withdrawn records (this applies to CDSR
     only)
•    Select a date range for your search

There is little value in restricting your search to individual databases because search
results are split by database allowing you to choose which set of results to look at.
Rather, the structure of the database you are most interested in should dictate the
search method you use.

On the whole we would recommend not using Advanced Search. This is because of the
misleading way in which terms are combined between the five search boxes. Just as
with the hint on using Simple Search on page 19 if you do use Advanced Search be sure
to incorporate all synonyms within a single search box and not split them up.

    For example, do not construct a search statement such as:

              "otitis media with effusion"
    OR        "glue ear"
    AND       antibiotic
    AND       child*

    Instead, you should construct it as:

              "otitis media with effusion" or "glue ear"
    AND       antibiotic
    AND       child*




                                               21
Search history
Clicking on Search History below the single search box on the home page takes you to
a much simpler search page than Advanced Search with a single search box.

The purpose of using Search History is to build up a search strategy consisting of
several search statements and then use commands to combine those individual terms
together. This forces you to think carefully about the construction of your search
statement. It encourages you to search for one term, or concept, at a time, and
additionally allows you to combine free text searching with MeSH searching (see page
24) to build up a thorough search strategy.




In addition to your search term you can

•   Select just new, updated, commented or withdrawn records (this applies to CDSR
    only)
•   Restrict your search to a particular database
•   Select a date range

Searching fields

You can now include field “labels” as part of your search statement to find the
occurrence of words or phrases in particular fields such as the title or author. Available
field labels are:

Field Name                  Label
 Abstract                    :ab
 Author                      :au
 Keywords                    :kw
 Source                      :so
 Title                       :ti
 Publication Type            :pt
 Tables                      :tb
 DOI                         :doi
 If no field tag is specified, “All text” is
searched as the default




                                               22
The following chart gives specific examples of how field labels can be used within a
search.

Options                        Example            Action
                               Diabetes    Searches diabetes in ALL text fields
No field tag
                                           (current default)
One field tag             Diabetes:ti      Searches diabetes in title field
                          Diabetes:ti,ab   Searches diabetes in title OR diabetes
Multiple field tags
                                           in abstract
Supports truncation       diabet*:ti       Searches diabet* in title
                          “diabetes        Searches the phrase diabetes mellitus
Supports phrase search
                          mellitus”:ti,ab  in the title or abstract field
Supports phrase search (Diabetes next      Searches the phrase diabetes mellitus
using NEXT operator       mellitus):ti,ab  in the title or abstract field
                          (diabetes near   Searches for diabetes within 6 words
Supports NEAR operator mellitus):ti,ab     (established default) of mellitus in the
                                           title or abstract field.
                          (diabetes near/5 Searches for diabetes within 5 words of
Supports NEAR/x operator
                          mellitus):ti,ab  mellitus in the title or abstract field
Support for more than one diabetes.ti and  Searches diabetes in article title and
term in a search having   endocrinology.so endocrinology in source
field labels


•       Simply key your search term into the search box and click go

This is in example of a free text search where three concepts have been searched for
individually:


    2                                  1




1. The red numbers tell you how many results (hits) have been found for each search
   term. You can also edit or delete individual search lines.

You will now want to combine these three search concepts together to find items
mentioning all of them.

2 .Notice the ID column where each line of the search has been given a number, eg #1.



                                               23
3. It is these numbers, including the #, that you use to combine terms together

   4. When searched, this combination also appears in the Current Search History




     3



                    4




Searching MeSH
This is a specific method of searching using the index terms assigned to many of the
records in the Cochrane Library. It is best used in conjunction with free text searching
carried out within Search History.

MeSH stands for Medical Subject Headings which is the name given to the thesaurus
(the system of indexing terms, or descriptors) found on the Medline database.

So far we have just searched in a free text style. This is generally fine when looking for
information in the full text databases on the Cochrane Library, namely CDSR and to a
lesser extent DARE. However, the other databases only provide you with abstracts
rather than whole documents. Therefore the most efficient way of searching CENTRAL,
HTA, NHS EED and DARE is to use, in conjunction with free text searching, the index
terms assigned to these articles, because you cannot guarantee that your chosen terms
will appear within the abstract itself.

You can get directly to the MeSH search option from the Cochrane Library home page
below the simple search box or access it from within Search History.

Below is a very simple free text search, conducted within Search History, for records
about the use of acupuncture to help people stop smoking.




                                            24
You will now want to incorporate the relevant MeSH terms for your two concepts into the
search.

•   Click on MeSH Search

•   Key in the term you want to match into the search box and click Thesaurus. This will
    search for likely terms within the indexing system.


                                                    Click here for Thesaurus




          1. Select the most appropriate term from the list

          2. One or more trees of terms will appear. You can choose to search within a
             specific tree or all trees where your term appears. The default is all trees
             and explode. Explode will thereby also search for any narrower terms
             which you may see below your term and indented to the right. You can only
             Explode all trees. The latter is generally recommended

          3. You can also either search only your chosen term (the one in red).

          4. If you tick the box Go directly to Search History you will be taken directly
             back to the Search History screen once you have clicked View Results,
             allowing you to enter further terms or to start combining terms.


                                                                      4




                    1

                                     2
                                            3




Once you have repeated this process for each search concept you are in a position to
combine your free text and MeSH searches together, or indeed just combine the MeSH
terms together:




                                           25
5




    5. Notice the use of OR to join together the free text and MeSH versions of each
      concept.

    You will notice that there are fewer results just using the MeSH headings. This will be a
    much tighter, more focused search, and so long as the records on the database have
    been indexed correctly and consistently, should give you very relevant results. If you are
    specifically interested in trials this is a good method of searching CENTRAL.

    Using a combination of free text and MeSH terms will, on the whole, provide you with a
    larger number of results. While this method does ensure that you don't miss anything
    you will also pick up irrelevant results.

    Adding qualifiers

    1. You may also add Qualifiers to your search terms. Qualifiers narrow your search to
    specific aspects of a topic, eg diet therapy, rehabilitation, complications,
    ultrasonography.




                                         1




    NB You can also search by qualifier alone, eg for the qualifier rehabilitation which
    could be attached to any thesaurus term.




                                                26
Viewing, printing and saving search results
    Viewing results
    To view your search results from within Search History click on the relevant search
    statement of the set you want to look at it, eg #7 and #8.

    No matter which search method you have you used you will be automatically taken to a
    list of results in the Cochrane Database of Systematic Reviews, or the first database in
    which results appear (unless you have restricted your search to a particular database).



                                      1




                                                                                                4
5
                                                3
                                                                             2




    1. You will also be able to see how many records have been found in each of the other
       databases. Click on any of these database headings to switch to the results from
       that database.

    2. Records are automatically displayed by Record Title, ie alphabetically, but you can
       re-order them to be displayed by Year, with the most recent items first, or by Match
       %, in order of likely relevance.

    3. Again, you may restrict the records displayed in this particular database to completed
       reviews or protocols.

    4. You may also have the option to Save Search or Edit Search. You will only see
       these options if you are viewing a single search statement which is not reliant on any
       other search statement. In the search example above this would apply to #1, #2, #4
       and #5 but not the other lines of the search because they combine other search
       statements together.

       Choosing to edit a free text search statement will take you to an Advanced Search
       screen. Choosing to edit a MeSH search will take you back to the MeSH search
       screen.
       You will only be able to save the search if you are logged on to your account. See
       page 32 for more information on saving searches.


                                               27
5. To view a complete record click on Record

You will see that the screen is now split in two, with the text of the systematic review on
the right (starting with an abstract and synopsis) and an index of the contents on the left.
This method of navigation applies to all the main databases with the exception of
CENTRAL and CMR.




                     2




                          1



The contents index has been re-organised and each heading is listed and explained on
page 29. Each section heading now appears in italics, Quick links; The review;
Supplementary information; About this article

1. The section Authors' conclusions will give you a baseline outcome of the study split
   into implications for practice and implications for research.

2. You should always check the date of the review, or its last update at the top of
   the review. If you are looking for the most up to date information on a topic there
may have been new trials published, which you will find on CENTRAL, since the review
was published.

You can also look at the Index terms with which the review has been indexed which
may help you to find similar studies.

Comments about the systematic review can be added via Submit Feedback, and any
replies from the authors read in Feedback.




                                             28
Different sections of a Cochrane Systematic Review


Abstract                 A structured abstract for the review, giving brief information on
                         its background, objectives, search strategy, selection criteria,
                         results and authors’ conclusions
Plain language           Summarises the findings of the review in one paragraph
summary
Quick links
What’s new               Details when published, updated and historical information of
                         the review
The review
Background               An overview of the condition and treatment on which the
                         evidence is being reviewed
Objectives               Aims of the review
Methods                  The types of study, participant, intervention and outcome
                         measures that were required for a study to be required
Results                  Detailed description of studies’ findings
Discussion               What the results show
Author’s conclusions     Gives a baseline outcome of the study, split into implications for
                         practice and implications for research
Acknowledgements         Acknowledgements of people who helped the authors
References               References to studies included and excluded from the review
Figures                  Other charts included in the review
Tables                   Tables of results
Supplementary
information
Data and analyses        Statistical analysis tables
Appendices               Featuring relevant additional information and documents
Feedback                 Replies from authors concerning any feedback queries from
                         this review
About this article
Contributions of         Indicate which authors contributed to which part of the review
authors
Declarations of interest Any potential conflict of interest on the part of the reviews
                         authors
Sources of support       List of any internal or external sources of support provided to
                         the review’s authors
Index terms              Look at the terms with which the review has been indexed to
                         help find similar studies
Submit feedback          Comments about the systematic review can be added here
Export citation          A tool to export your citation into a tool such as Reference
                         Manager
Protocol and previous    Any protocols and earlier versions of this review
versions




                                            29
Following up primary references
If you go to References and click on Links beside an article reference you may be taken
to a further link providing you with title and abstract information (note, not full text) for
that primary reference in PubMed which is the freely available online version of the
Medline database.


Interpreting graphs
A key component of the systematic review is the statistical method of combining the
results of different primary studies that look at the same intervention. This is known as
meta-analysis and the results of a meta-analysis are usually shown in one or more odds
ratio diagrams.

At first glance they can be rather frightening but you don't need an in-depth
understanding of statistics to be able to interpret them quite simply.

This odds ratio diagram looks at the outcome of smoking cessation after 6 months
comparing sham acupuncture (the control) with real acupuncture (the treatment).




The odds ratio for each individual trial is shown by a blue square. The horizontal line
through it represents the confidence interval for that result.

The meta-analysis result is shown by the black diamond the width of which represents
the confidence interval. Confidence intervals are usually shown as 95% confidence
intervals, representing the range in which we can be 95% confident that the real result of
the study lies.

The vertical line through the diagram at the odds ratio of one is known as the line of no
effect. Anything crossing this line cannot show whether the intervention is any better or
worse than the control. But results that fall to the left of the line indicate less of the
outcome in the experimental (treatment) group and results to the right of the line indicate
more of the outcome in the treatment group. Just be aware that more of an outcome is
not necessarily a good thing, ie when you are measuring mortality.

                                             30
Saving and printing search results
    You can print entire records, including the very lengthy systematic reviews, if you view
    them as PDF files. Simply use the integral print and save icons within Adobe Acrobat.




    Otherwise you can print, or save to file, selected citations.




1




                                 2


            3

       1. Put a tick in the box beside the individual references you are interested in or click
          select all at the bottom of the list

       2. Select all will pick up the entire search set from the database you are viewing but
          you can select records from different databases and export them together.

       3. Click Export Selected Citations

    This screen will appear:




                                        1
       2




       1. You can choose to select just the Citation or Abstract and citation from the drop
          down Export Type box

       2. Click Go


                                                31
You will then be asked whether you want to open the file on your computer now or to
save it to your hard drive or a floppy disk.

N.B. There is a distinction made on the Cochrane Library between Save Search and
Save Search Strategy.

   Saving a search allows you to save individual search statements, or lines of a
   search

   Saving a search strategy allows you to save a string of search commands




Saving your search

You will see this option when you are viewing the results of individual search statements.

   1. Click on Save Search. If you are not already logged on you will be asked to enter
      your username and password.




                                                                                1




                                            32
Saving your search strategy
    Saving a search strategy allows you to save a string of search commands

    1. You may save your search strategy from within the Search History function as long
    as you are logged on to your account.

    2. You may also clear your history at any point.




                               2
1
    Once you have clicked Save Search Strategy the dialog box below appears for you to
    enter the name of your search and any comments.




            1


       1. Then click Save Search Strategy



    The next time you log on the Cochrane Library you will be able to access your saved
    searches and search strategies by clicking Saved Searches below the simple search
    box on the home page or from within whichever search mode you are in.




                                                33
Saved searches do not currently appear in the My Profile banner at the top of the
screen.




                                        1                      3
     2


   1. To run the search click Run

   2. To delete any saved searches, check the tick box(es) and click Delete Checked
      Items

   3. To export your saved search, click export. This allows you to download a copy of
      your search strategy to include it in a word processing document. Select either
      open or save




Each line of your search will be displayed separately. The file is in .txt format, as shown
below.




                                             34
Setting alerts
Currently, alerts may be set for individual search statements, not full search strategies.




                                                                       To activate the alert
                                                                       click on this link


•   If your search can be set as an alert you will see   Activate Alert beside it.

•   To cancel an alert click on   Stop Alert

You will be sent an email to the address you gave when you set up your profile if new
records matching your search criteria are added to the database at subsequent quarterly
updates.

You may set various options for your alerts by clicking My Profile in the banner at the
top of the screen.




                                               35

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Cochrane Library Training Guide

  • 1. The Cochrane Library A Training Guide Ron Hudson Outreach Training Librarian Croydon Health Library and Resources Service NHS Croydon 12-18 Lennard Road Croydon CR9 2RS Tel: 020 8274 6316 Mob: 07733 300 104 Email: ron.hudson@croydonpct.nhs.uk July 2010 With thanks to Mary Last, Clinical Support Librarian, Bloomsbury Healthcare Library
  • 2. Contents 1. Overview - sources of research-based evidence Sources of research-based evidence ............................................................. 3 The hierarchy of evidence ............................................................................... 4 2. Introduction to the Cochrane Library What is the Cochrane Library? ........................................................................ 5 When to use the Cochrane Library.................................................................. 5 Background and history of the Cochrane Library ............................................ 6 The databases ................................................................................................ 7 Definitions ……………………………………………………………………………9 3. Getting started Accessing the Cochrane Library.................................................................... 10 Site registration and password ..................................................................... 10 Explaining the home page ............................................................................ 12 4. Browsing the Cochrane Library Browsing the main databases ...................................................................... 13 Cochrane Database of Systematic Reviews Symbols ..……………………….14 Browsing the Cochrane Database of Systematic Reviews ............................ 15 Browsing by Topic.................................................................................... 15 Browsing by Review Group ..................................................................... 15 5. Searching the Cochrane Library Search tips and tricks ................................................................................... 17 Simple search ............................................................................................... 19 Advanced search .......................................................................................... 20 Search history .............................................................................................. 22 Searching MeSH .......................................................................................... 24 6. Viewing, printing and saving search results Viewing search results .................................................................................. 27 Different sections of a Cochrane Systematic Review ……………………29 Following up on primary references………………………………………….30 Interpreting graphs ................................................................................... 30 Saving and printing search results ................................................................ 31 Saving a search............................................................................................. 32 Saving a search strategy ............................................................................... 33 Setting alerts ................................................................................................ 35 2
  • 3. Overview - sources of research-based evidence Evidence-based practice has been described as: … the conscientious, explicit, and judicious use of current best evidence in making decisions about the care of individual patients. The practice of evidence based medicine means integrating individual clinical expertise with the best available external clinical evidence from systematic research. Sackett DL et al. BMJ, 1996, Vol 312, pp 71-72 The range of the ‘external clinical evidence’ available to health care professionals is often described as a hierarchy and this is shown on the following page, from individual opinion at the bottom of the pyramid, through research methodologies of varying rigour. You can access most of this enormous quantity of research-based evidence through the primary journal literature by searching databases search as Medline. There are, however, specialist resources that you can go to which evaluate and summarise available research evidence when you want to know about the effectiveness of a particular health care intervention. These can be divided into: • Reviews eg Cochrane Database of Systematic Reviews Reviews are examples of secondary research. Standard reviews compare the results of two or more primary studies. The systematic review, however, aims to give a full picture of a topic by identifying all available evidence, appraising it and then presenting a cumulative summary. This usually includes a meta-analysis, the combination of results from primary studies into a single statistical result. More information about systematic reviews can be found on page 9. • Digests eg Clinical Evidence Digests identify the major evidence on particular topics and provide key messages. • Guidelines eg NeLH Guidelines Finder Guidelines provide recommendations for effective practice based on current evidence. If you find a systematic review or summary of current evidence which answers your question you will be saved the work of searching databases for journal literature as well as much of the reading and critical appraisal involved. 3
  • 4. The Hierarchy of Evidence BEST A systematic review of at least two randomized controlled trials A randomized, controlled trial A cohort study A case-control study An uncontrolled study with dramatic results An expert committee report or similar Anecdotal evidence WORST Harrison S. (ed) Evidence-based medicine: its relevance and application to primary care commissioning. London: Royal Society of Medicine Press Ltd, 1998. 4
  • 5. Introduction to the Cochrane Library What is the Cochrane Library? The Cochrane Library is described as the best single source of reliable information on the effects of interventions in health care. It is designed to provide information and evidence to support decisions taken in health care and to inform those receiving care. The Cochrane Library is a collection of databases containing systematic reviews, health technology assessments, economic evaluations and controlled trials. More information about each database can be found on page 7. Some databases provide full-text articles, some just bibliographic details with abstracts. When to use the Cochrane Library The whole of the Cochrane Library is concerned with the effectiveness of interventions for a given health care problem or in a particular health care situation. The Cochrane Library is useful for answering the following types of queries: • What is the effectiveness of treatment X in condition Y? What is the effectiveness of aspirin in vascular dementia? • Is treatment A better than treatment B? Is there any evidence that clozapine is more effective in the treatment of schizophrenia than standard antipsychotics? • What is an effective intervention to achieve outcome Z? What are the most effective strategies for stopping smoking? The Cochrane Library is not useful for these types of questions: • General health care information Are there any new drugs for manic depression? • Statistical information What is the teenage pregnancy rate? • Cause, prognosis, epidemiology or risk factors for an illness What are the health effects of unemployment? • Guidelines • Current research (apart from systematic reviews and randomised controlled trials) 5
  • 6. Background and history of the Cochrane Library Since 1996, systematic reviews prepared and maintained by the Cochrane Collaboration have been published in The Cochrane Library, along with bibliographic and quality- assessed material on the effects of health care interventions submitted by others. Cochrane reviews are a highly regarded source of evidence about the effects of health care interventions and widely thought of as being of better quality, on average, than their counterparts in print journals. The first issue of the Cochrane Library in 1996 therefore incorporated: • Regularly-updated systematic reviews and protocols for reviews in preparation • Quality appraisals of reviews published elsewhere • A register of controlled trials These collections were viewed as part of a hierarchy of evidence, ranging from regularly updated reviews, to high-quality reviews published elsewhere, to reports of individual controlled trials. There are now six main databases plus one other giving information about the Cochrane Collaboration and its Review Groups. Further information on each of the main databases can be found below. Further information The Cochrane Collaboration's web site - www.cochrane.org/ - is a useful source of information. The Newcomer's Guide on it provides background information on the Cochrane Collaboration and its systematic reviews. An article about the genesis and history of the Cochrane Library between 1988 and 2003 can be found at www.update-software.com/history/clibhist.htm. 6
  • 7. The Databases Cochrane Database of Systematic Reviews (CDSR; Cochrane Reviews) A systematic review identifies an intervention for a specific disease or other problem in health care, and determines whether or not this intervention works. To do this authors locate, appraise and synthesise evidence from as many relevant scientific studies as possible. They summarise conclusions about effectiveness, and provide a unique collation of the known evidence on a given topic, so that others can easily review the primary studies for any intervention. As of Issue 4, 2008, this database also includes systematic reviews of diagnostic test accuracy. Cochrane diagnostic test accuracy reviews are not based on randomized controlled trials, but mainly on cross sectional studies. From Issue 2, 2007, this database also includes the methodology reviews that were previously part of Cochrane Database of Methodology Reviews (CDMR; Methods Reviews) Cochrane Methodology Reviews are full-text systematic reviews of methodological studies. Highly structured and systematic, evidence from methodological research is included or excluded on the basis of explicit quality criteria, thus minimising bias. Each review covers a specific and well-defined area of methodology. Data from studies are often combined statistically to increase the power of the findings of numerous studies, which on their own may be too small to produce reliable results. In such cases, the review may also include graphs presenting the data from each individual study. Protocols provide information about reviews which are currently being written. They summarise the background and the rationale of the review. Database of Abstracts of Reviews of Effects (DARE; Other Reviews) DARE includes structured abstracts of systematic reviews from around the world which have been evaluated by the reviewers at the NHS Centre for Reviews and Dissemination (NHS CRD) at the University of York. Only reviews that meet minimum quality criteria are included in DARE. These reviews cover topics that have yet to be addressed by a Cochrane review. Cochrane Central Register of Controlled Trials (CENTRAL; Clinical Trials) CENTRAL includes details of published articles taken from bibliographic databases (notably Medline and Embase), and other published and unpublished sources. CENTRAL records include the title of the article, information on where it was published (bibliographic details) and, in many cases, a summary of the article. They do not contain the full text of the article. Trials are identified from multiple sources, including searches of bibliographic databases, hand searches of many hundreds of journals and conference proceedings, and searches of other trial registers. 7
  • 8. Cochrane Methodology Register (CMR; Methods Studies) This is a bibliography of publications which report on methods used in the conduct of controlled trials. It includes journal articles, books, and conference proceedings. These articles are taken from the Medline database and from hand searches. The database contains studies of methods used in reviews and in more general methodological studies which could be relevant to anyone preparing a systematic review. CMR does not contain the full text of articles. Health Technology Assessment Database (HTA; Technology Assessments) This database contains information on healthcare technology assessments (defined as prevention and rehabilitation, vaccines, pharmaceuticals and devices, medical and surgical procedures and the systems within which health is protected and maintained). The database contains details of ongoing projects and completed publications from health technology assessment organisations. HTA records follow a standard structure. Some records contain the title of the project, with the name of the centre responsible and an indication of where further details can be obtained. Other records contain publication details, with structured abstracts where available. Records do not, in either case, contain the full text of the report. NHS Economic Evaluation Database (NHS EED; Economic Evaluations) This database contains structured abstracts of articles describing economic evaluations of health care interventions. The articles are identified by searching through key medical journals, bibliographic databases and less widely available literature. A paper will be included if it provides a comparison of treatments and examines both the costs and outcomes of the alternatives. The database also includes bibliographic details of articles examining relevant topics, (for example the burden of illness, economic methodology papers, and reviews of economic evaluations), and short abstracts of studies originally included in the Department of Health Register of Cost-Effective Studies. Records do not contain the full text of the original article. 8
  • 9. Definitions Systematic Review: Systematic reviews differ from other types of review in that they adhere to a strict design in order to make them more comprehensive, thus minimising the chance of bias, and ensuring their reliability. Rather than reflecting the views of the authors, or being based on a partial selection of the literature, (as is the case with many articles and reviews that are not explicitly systematic), they contain all known references to trials on a particular intervention and a comprehensive summary of the available evidence. The reviews are therefore also valuable sources of information for those receiving care, as well as for decision makers and researchers. Economic Evaluation: Full economic evaluations, as defined by the NHS CRD, can be one of the following: • a cost-benefit analysis (CBA), which measures both costs and benefits in monetary values and calculates net monetary gains or losses (presented as a cost-benefit ratio); • a cost-effectiveness analysis (CEA), which compares interventions with a common outcome (such as blood pressure level) to discover which produces the maximum outcome for the same input of resources in a given population; • a cost-utility analysis (CUA), which measures the benefits of alternative treatments or types of care by using clearly defined utility measures (such as quality-adjusted life years) 9
  • 10. Getting started Accessing the Cochrane Library You can either go directly to the Cochrane Library at www.thecochranelibrary.com or from the following link: • National Library for Health (under Evidence Based Reviews) – www.library.nhs.uk The databases are updated monthly. Also on the National Library for Health site under Evidence Based Reviews you will find links to DARE and NHS EED which represent the most up to date versions of these databases. They can be searched individually. Site registration and password You do not need a password to access the Cochrane Library or to conduct one-off searches, view full records or to print or to save them, but if you are likely to be a regular visitor to Cochrane and would like to be able to save searches and search strategies and to set up email alerts, you should register yourself on the Wiley InterScience site. NB You cannot use your Athens username and password to log on to the site. 1 2 1. Click ACCESS in the right centre of the screen 2. Click Register for Wiley Interscience • Fill in the registration form Your email address and the password you choose will be used as your username and password for the future. Try to register using your work email address and to avoid an email address ending in .com. You must also check the box to indicate that you have read the Terms of Usage. The information you enter will not be used by a third party. 10
  • 11. Click Submit Registration You will receive an email confirming receipt of your completed registration form. You must validate your account by clicking on the link in the message within 24 hours otherwise you may have to register all over again. To get back to the Cochrane Library: 3. Type Cochrane in the search box 4. Check the radio button Publication Titles 5. Click Go 6 4 3 5 • Then select the current issue of the Cochrane Library from the list of results You will now be back at the Cochrane Library home page. Logging on subsequently • The next time you access the Cochrane Library and click Log In you are taken to the main Wiley InterScience home page to enter your username and password. It is not recommended to check the box Remember Me if you share your computer with others. Once you have logged on you will still be on the Wiley page so will need to get back to the Cochrane Library in the way described above. Timing out You will find that after periods of inactivity during a search session you will be timed out and asked to re-enter your username and password. You will be taken back to where you were in your search and not lose anything. 6. Always remember to Log Out when you have finished a search session. 11
  • 12. Explaining the home page Find out more about the Cochrane Collaboration Return to the home page Click here to log in if you have registered for a Enter your username search term Links enabling you to browse the resources on the Cochrane Library There are different ways of accessing the Cochrane Database of Systematic Reviews. You can view them: By Topic – Select a topic of interest and narrow it down New Reviews – Protocols and Reviews added to the database in the latest update Updated Reviews – Only those Reviews which have been recently updated A-Z – List of Reviews by title (warning, there are over 5,000 titles in alphabetical order) By Review Group – Reviews and Protocols by one of the 51 specific Review Groups e.g. Cochrane Drugs and Alcohol Group 12
  • 13. Browsing the Cochrane Library Four of the six main databases can be browsed, alphabetically by title, by clicking on their name. Where necessary use the A-Z links and scroll bar to navigate the lists of titles presented. The exception is CENTRAL. Because it is so large it is not practical to browse. Choosing to browse this database will take you to an advanced search screen where you can restrict your search to CENTRAL alone. See page 20 for Advanced Searching. This is the A-Z browse screen for the Cochrane Database of Systematic Reviews: 2 1 1. The A-Z navigation tool 2. This allows various portions of the database to be displayed. The default will be all records but some of the databases will allow you to choose subsets of records. These options carry over to when you are viewing search results (see page 27). 13
  • 14. Cochrane Database of Systematic Reviews Symbols On the Cochrane Database of Systematic Reviews you may also find the following symbols after records, which have been changed with Issue 2, 2008: A full review, complete with results and discussion, meta- analysis and an odds-ratio diagram This is an outline of a review in preparation, including background, rationale and methods A full-text systematic review of methodological studies A full-text systematic review of studies assessing accuracy of diagnostic tests A new review or protocol that has been published in the most recent quarter A new search for studies and content updated (no change to conclusions) A new search for studies and content updated (conclusions changed) There has been an important change to the conclusions of the review as published in the most recent quarter The protocol has been amended to reflect a change in scope as published in the most recent quarter The review or protocol has been withdrawn, which may be because it was considered to be out of date. Reasons for withdrawal are specified in the article The review includes comments. Readers can submit comments which are incorporated into the review together with answers and feedback from the review authors 14
  • 15. Browsing the Cochrane Database of Systematic Reviews The Cochrane Database of Systematic Reviews can be browsed by topic, new or updated reviews, A-Z or by Cochrane Review Group. Browsing by topic Use the drop-down list to browse review topics by your chosen Cochrane Collaborative Review Group. Selecting a review group shows the broad topic areas which that group covers. Clicking on a heading opens out further sub-sections until you find a review of interest. Click Select your here to chosen Cochrane see a Collaborative complete Review Group review Browsing by review group This brings up a list of the same review groups as searching by topic. But this time when you select the name of the review group you are interested in you are presented with a complete list of reviews for that group. This are split into protocols and reviews, arranged alphabetically within each section. 15
  • 16. Searching the Cochrane Library There are four ways of searching the Cochrane Library: 1. Simple search (see page 19) Using the single search box on the home page is fine if you want to do a very quick, one off search on a topic but you will not be able to build up a detailed or refined search strategy. 2. Advanced search (see page 20) Advanced search allows you to enter several search concepts in up to five search boxes at one time. However we have found problems with this method and do not recommend it. 3. Search history (see page 22) Conducting searches from within search history allows you to build up detailed search strategies by combining search statements together from a single screen. Any searches you perform, no matter which method of searching you have used, will be stored under search history for the duration of your current search session. 4. MeSH search (see page 24) This is a specific method of searching using the index terms assigned to many of the records in the Cochrane Library. It is best used in conjunction with free text searching carried out within search history. 16
  • 17. Search tips and tricks Unless you are searching using MeSH you will be entering your search terms in free-text format. There are number of rules which will help you get the best out of the databases. Combining terms The Cochrane Library supports the use of AND and OR to using AND or OR connect search concepts together, eg • postnatal and depression • cancer or neoplasm Hints: Just as when you use a search engine such as Google, typing in two or more words will automatically "AND" them together, so the AND can be omitted, eg • postnatal depression Similarly, OR can be replaced by a comma, eg • cancer, neoplasm Phrase searching If you want two words to be adjacent to each other the phrase must be enclosed in quotation marks, eg • "postnatal depression" Proximity connector Using the connector NEAR between words or phrases means that they will appear within 6 or 7 words of each other (excluding stop words), in any order, eg • postnatal near depression You can change how many words are between them, eg • postnatal near/3 depression Spelling tips Most plurals are automatically searched for, eg • foot would also find feet If you don't want to find the plural, type in the singular form in quotation marks, eg • "foot" Common spelling variations are also automatically searched, eg • randomise or randomize 17
  • 18. Wildcard/truncation The wildcard character is the asterisk *. It can be used at the beginning, end or in the middle of words. At the end of a word it acts as a truncation symbol to indicate other letters that might appear after a word stem, eg • diabet* would find diabetic or diabetes Hint: If you would only find the plural form of a word using truncation there is no need as plurals are found automatically (see above) At the beginning of a word, eg • *natal would find prenatal or antenatal or postnatal In the middle of the words to pick up variations, eg • hyp*tension would find both hypertension and hypotension Hint: Although common spelling variations should be found for you (see above), if you want to be sure that you have captured all possible spelling variants, use the wildcard character, eg • h*ematology would find haematology or hematology The wildcard character should also be used to replace potentially accented letters within words, eg • “m*ni*re's disease” to find ménière's disease Punctuation Hyphens are treated as spaces, so hyphenated and unhyphenated forms of words will be searched for simultaneously • eg “body weight” will also find “body-weight’’ Other punctation, such as the apostrophe, are recognised, but can equally be left out, eg either St John's wort or St Johns wort both work fine 18
  • 19. Simple search 2 1 You can therefore conduct simple searches using the above search tips in the single search box on the Cochrane Library front page: 1. Key in your search terms and click Go 2. As a default the Title, Abstract and Keywords fields are searched, but you can also assign your search to other fields of the database, eg just the record title. For more information about the various database fields see page 20. Hint If you use simple search for a search containing several search terms, including synonyms, be sure to use brackets around terms to ensure that the search you want runs smoothly. For example: • ("otitis media with effusion" or "glue ear") and antibiotic and child* It is vital to put brackets around the two synonymous terms to ensure that they are OR'ed together. With complex databases such as the Cochrane Library, AND commands will always run first within a search string, so without the brackets the search would in effect be: • "otitis media with effusion" or ("glue ear" and antibiotic and child*) 19
  • 20. Advanced Search Advanced search allows you to enter several search concepts in up to five search boxes at one time. However there are problems with this method and using Search History is recommended in preference (see page 22). • Click on Cochrane Advanced Search below the single search box on the home page You will see five interconnected search boxes and various options for restricting your search. Database fields All text Your term in any field of all the databases. For CDSR this will be the full text of the systematic review. Record title Article titles only Author Authors of articles only Abstract Abstracts only Keywords Your term in the Index field in all databases except "About" which don’t have an index field. All of the databases except CMR use MeSH as their index terms. CMR uses its own index terms called CMR words. CDSR, CENTRAL and NHS EED additionally use MeSH check words. Title, Abstract Your term in any of the fields, title, abstract or keyword. or Keywords 20
  • 21. Tables Your term in the Table field. Tables only appear in the CDSR database. Publication type Searches the Publication field in CENTRAL only. The following possible terms used are: clinical trial; journal article; multicenter study; randomized controlled trial; controlled clinical trial. Source Searches the title field or the field which details the source of the original article referenced in the database. DOI A search for the DOI number in the DOA field of CDSR. (DOI means Digital Object Identifier see www.doi.org/faq.html#1) Restrictions and limits You can also choose to: • Restrict your search to particular databases within the Cochrane Library • Select just new, updated, commented or withdrawn records (this applies to CDSR only) • Select a date range for your search There is little value in restricting your search to individual databases because search results are split by database allowing you to choose which set of results to look at. Rather, the structure of the database you are most interested in should dictate the search method you use. On the whole we would recommend not using Advanced Search. This is because of the misleading way in which terms are combined between the five search boxes. Just as with the hint on using Simple Search on page 19 if you do use Advanced Search be sure to incorporate all synonyms within a single search box and not split them up. For example, do not construct a search statement such as: "otitis media with effusion" OR "glue ear" AND antibiotic AND child* Instead, you should construct it as: "otitis media with effusion" or "glue ear" AND antibiotic AND child* 21
  • 22. Search history Clicking on Search History below the single search box on the home page takes you to a much simpler search page than Advanced Search with a single search box. The purpose of using Search History is to build up a search strategy consisting of several search statements and then use commands to combine those individual terms together. This forces you to think carefully about the construction of your search statement. It encourages you to search for one term, or concept, at a time, and additionally allows you to combine free text searching with MeSH searching (see page 24) to build up a thorough search strategy. In addition to your search term you can • Select just new, updated, commented or withdrawn records (this applies to CDSR only) • Restrict your search to a particular database • Select a date range Searching fields You can now include field “labels” as part of your search statement to find the occurrence of words or phrases in particular fields such as the title or author. Available field labels are: Field Name Label Abstract :ab Author :au Keywords :kw Source :so Title :ti Publication Type :pt Tables :tb DOI :doi If no field tag is specified, “All text” is searched as the default 22
  • 23. The following chart gives specific examples of how field labels can be used within a search. Options Example Action Diabetes Searches diabetes in ALL text fields No field tag (current default) One field tag Diabetes:ti Searches diabetes in title field Diabetes:ti,ab Searches diabetes in title OR diabetes Multiple field tags in abstract Supports truncation diabet*:ti Searches diabet* in title “diabetes Searches the phrase diabetes mellitus Supports phrase search mellitus”:ti,ab in the title or abstract field Supports phrase search (Diabetes next Searches the phrase diabetes mellitus using NEXT operator mellitus):ti,ab in the title or abstract field (diabetes near Searches for diabetes within 6 words Supports NEAR operator mellitus):ti,ab (established default) of mellitus in the title or abstract field. (diabetes near/5 Searches for diabetes within 5 words of Supports NEAR/x operator mellitus):ti,ab mellitus in the title or abstract field Support for more than one diabetes.ti and Searches diabetes in article title and term in a search having endocrinology.so endocrinology in source field labels • Simply key your search term into the search box and click go This is in example of a free text search where three concepts have been searched for individually: 2 1 1. The red numbers tell you how many results (hits) have been found for each search term. You can also edit or delete individual search lines. You will now want to combine these three search concepts together to find items mentioning all of them. 2 .Notice the ID column where each line of the search has been given a number, eg #1. 23
  • 24. 3. It is these numbers, including the #, that you use to combine terms together 4. When searched, this combination also appears in the Current Search History 3 4 Searching MeSH This is a specific method of searching using the index terms assigned to many of the records in the Cochrane Library. It is best used in conjunction with free text searching carried out within Search History. MeSH stands for Medical Subject Headings which is the name given to the thesaurus (the system of indexing terms, or descriptors) found on the Medline database. So far we have just searched in a free text style. This is generally fine when looking for information in the full text databases on the Cochrane Library, namely CDSR and to a lesser extent DARE. However, the other databases only provide you with abstracts rather than whole documents. Therefore the most efficient way of searching CENTRAL, HTA, NHS EED and DARE is to use, in conjunction with free text searching, the index terms assigned to these articles, because you cannot guarantee that your chosen terms will appear within the abstract itself. You can get directly to the MeSH search option from the Cochrane Library home page below the simple search box or access it from within Search History. Below is a very simple free text search, conducted within Search History, for records about the use of acupuncture to help people stop smoking. 24
  • 25. You will now want to incorporate the relevant MeSH terms for your two concepts into the search. • Click on MeSH Search • Key in the term you want to match into the search box and click Thesaurus. This will search for likely terms within the indexing system. Click here for Thesaurus 1. Select the most appropriate term from the list 2. One or more trees of terms will appear. You can choose to search within a specific tree or all trees where your term appears. The default is all trees and explode. Explode will thereby also search for any narrower terms which you may see below your term and indented to the right. You can only Explode all trees. The latter is generally recommended 3. You can also either search only your chosen term (the one in red). 4. If you tick the box Go directly to Search History you will be taken directly back to the Search History screen once you have clicked View Results, allowing you to enter further terms or to start combining terms. 4 1 2 3 Once you have repeated this process for each search concept you are in a position to combine your free text and MeSH searches together, or indeed just combine the MeSH terms together: 25
  • 26. 5 5. Notice the use of OR to join together the free text and MeSH versions of each concept. You will notice that there are fewer results just using the MeSH headings. This will be a much tighter, more focused search, and so long as the records on the database have been indexed correctly and consistently, should give you very relevant results. If you are specifically interested in trials this is a good method of searching CENTRAL. Using a combination of free text and MeSH terms will, on the whole, provide you with a larger number of results. While this method does ensure that you don't miss anything you will also pick up irrelevant results. Adding qualifiers 1. You may also add Qualifiers to your search terms. Qualifiers narrow your search to specific aspects of a topic, eg diet therapy, rehabilitation, complications, ultrasonography. 1 NB You can also search by qualifier alone, eg for the qualifier rehabilitation which could be attached to any thesaurus term. 26
  • 27. Viewing, printing and saving search results Viewing results To view your search results from within Search History click on the relevant search statement of the set you want to look at it, eg #7 and #8. No matter which search method you have you used you will be automatically taken to a list of results in the Cochrane Database of Systematic Reviews, or the first database in which results appear (unless you have restricted your search to a particular database). 1 4 5 3 2 1. You will also be able to see how many records have been found in each of the other databases. Click on any of these database headings to switch to the results from that database. 2. Records are automatically displayed by Record Title, ie alphabetically, but you can re-order them to be displayed by Year, with the most recent items first, or by Match %, in order of likely relevance. 3. Again, you may restrict the records displayed in this particular database to completed reviews or protocols. 4. You may also have the option to Save Search or Edit Search. You will only see these options if you are viewing a single search statement which is not reliant on any other search statement. In the search example above this would apply to #1, #2, #4 and #5 but not the other lines of the search because they combine other search statements together. Choosing to edit a free text search statement will take you to an Advanced Search screen. Choosing to edit a MeSH search will take you back to the MeSH search screen. You will only be able to save the search if you are logged on to your account. See page 32 for more information on saving searches. 27
  • 28. 5. To view a complete record click on Record You will see that the screen is now split in two, with the text of the systematic review on the right (starting with an abstract and synopsis) and an index of the contents on the left. This method of navigation applies to all the main databases with the exception of CENTRAL and CMR. 2 1 The contents index has been re-organised and each heading is listed and explained on page 29. Each section heading now appears in italics, Quick links; The review; Supplementary information; About this article 1. The section Authors' conclusions will give you a baseline outcome of the study split into implications for practice and implications for research. 2. You should always check the date of the review, or its last update at the top of the review. If you are looking for the most up to date information on a topic there may have been new trials published, which you will find on CENTRAL, since the review was published. You can also look at the Index terms with which the review has been indexed which may help you to find similar studies. Comments about the systematic review can be added via Submit Feedback, and any replies from the authors read in Feedback. 28
  • 29. Different sections of a Cochrane Systematic Review Abstract A structured abstract for the review, giving brief information on its background, objectives, search strategy, selection criteria, results and authors’ conclusions Plain language Summarises the findings of the review in one paragraph summary Quick links What’s new Details when published, updated and historical information of the review The review Background An overview of the condition and treatment on which the evidence is being reviewed Objectives Aims of the review Methods The types of study, participant, intervention and outcome measures that were required for a study to be required Results Detailed description of studies’ findings Discussion What the results show Author’s conclusions Gives a baseline outcome of the study, split into implications for practice and implications for research Acknowledgements Acknowledgements of people who helped the authors References References to studies included and excluded from the review Figures Other charts included in the review Tables Tables of results Supplementary information Data and analyses Statistical analysis tables Appendices Featuring relevant additional information and documents Feedback Replies from authors concerning any feedback queries from this review About this article Contributions of Indicate which authors contributed to which part of the review authors Declarations of interest Any potential conflict of interest on the part of the reviews authors Sources of support List of any internal or external sources of support provided to the review’s authors Index terms Look at the terms with which the review has been indexed to help find similar studies Submit feedback Comments about the systematic review can be added here Export citation A tool to export your citation into a tool such as Reference Manager Protocol and previous Any protocols and earlier versions of this review versions 29
  • 30. Following up primary references If you go to References and click on Links beside an article reference you may be taken to a further link providing you with title and abstract information (note, not full text) for that primary reference in PubMed which is the freely available online version of the Medline database. Interpreting graphs A key component of the systematic review is the statistical method of combining the results of different primary studies that look at the same intervention. This is known as meta-analysis and the results of a meta-analysis are usually shown in one or more odds ratio diagrams. At first glance they can be rather frightening but you don't need an in-depth understanding of statistics to be able to interpret them quite simply. This odds ratio diagram looks at the outcome of smoking cessation after 6 months comparing sham acupuncture (the control) with real acupuncture (the treatment). The odds ratio for each individual trial is shown by a blue square. The horizontal line through it represents the confidence interval for that result. The meta-analysis result is shown by the black diamond the width of which represents the confidence interval. Confidence intervals are usually shown as 95% confidence intervals, representing the range in which we can be 95% confident that the real result of the study lies. The vertical line through the diagram at the odds ratio of one is known as the line of no effect. Anything crossing this line cannot show whether the intervention is any better or worse than the control. But results that fall to the left of the line indicate less of the outcome in the experimental (treatment) group and results to the right of the line indicate more of the outcome in the treatment group. Just be aware that more of an outcome is not necessarily a good thing, ie when you are measuring mortality. 30
  • 31. Saving and printing search results You can print entire records, including the very lengthy systematic reviews, if you view them as PDF files. Simply use the integral print and save icons within Adobe Acrobat. Otherwise you can print, or save to file, selected citations. 1 2 3 1. Put a tick in the box beside the individual references you are interested in or click select all at the bottom of the list 2. Select all will pick up the entire search set from the database you are viewing but you can select records from different databases and export them together. 3. Click Export Selected Citations This screen will appear: 1 2 1. You can choose to select just the Citation or Abstract and citation from the drop down Export Type box 2. Click Go 31
  • 32. You will then be asked whether you want to open the file on your computer now or to save it to your hard drive or a floppy disk. N.B. There is a distinction made on the Cochrane Library between Save Search and Save Search Strategy. Saving a search allows you to save individual search statements, or lines of a search Saving a search strategy allows you to save a string of search commands Saving your search You will see this option when you are viewing the results of individual search statements. 1. Click on Save Search. If you are not already logged on you will be asked to enter your username and password. 1 32
  • 33. Saving your search strategy Saving a search strategy allows you to save a string of search commands 1. You may save your search strategy from within the Search History function as long as you are logged on to your account. 2. You may also clear your history at any point. 2 1 Once you have clicked Save Search Strategy the dialog box below appears for you to enter the name of your search and any comments. 1 1. Then click Save Search Strategy The next time you log on the Cochrane Library you will be able to access your saved searches and search strategies by clicking Saved Searches below the simple search box on the home page or from within whichever search mode you are in. 33
  • 34. Saved searches do not currently appear in the My Profile banner at the top of the screen. 1 3 2 1. To run the search click Run 2. To delete any saved searches, check the tick box(es) and click Delete Checked Items 3. To export your saved search, click export. This allows you to download a copy of your search strategy to include it in a word processing document. Select either open or save Each line of your search will be displayed separately. The file is in .txt format, as shown below. 34
  • 35. Setting alerts Currently, alerts may be set for individual search statements, not full search strategies. To activate the alert click on this link • If your search can be set as an alert you will see Activate Alert beside it. • To cancel an alert click on Stop Alert You will be sent an email to the address you gave when you set up your profile if new records matching your search criteria are added to the database at subsequent quarterly updates. You may set various options for your alerts by clicking My Profile in the banner at the top of the screen. 35