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Vectors
◘ we will taking about 3 Vectors in our lecture : -
1- Cosmid Vector .
2- Yeast artificial chromosome Vector .
3- Plant Vector .
Cosmid Vector
• A cosmid is a type of hybrid plasmid that contains a Lambda
phage cos sequence, (cos sites + plasmid = cosmids)
• Host cell : ( Bacteria ) Prokaryotic (E. coli host )
• DNA sequences are originally from the lambda phage.
• They are often used as a cloning vector in genetic engineering
• Cosmids can contain 44 k bp of DNA.
2
• They also contain a gene for selection such as antibiotic resistance, so
that the transformed cells can be identified by plating on a medium
containing the antibiotic. Those cells which did not take up the cosmid
would be unable to grow.
• They Have Multiple cloning site ( poly linker ) , and Origin of
replication .
• Extra-chromosomal circular DNA molecule .
◘ Cloning Steps :-
1- Preparation .
- Target DNA: the genomic DNA to be cloned has to be cut into the
appropriate size range of restriction fragments , By using Restriction
Enzymes , And Cut the Cosmid Cloning site ( poly linker ) by the same
Restriction enzyme , Then Ligation of physically unlinked fragments.
2- Packaging
- the total DNA is transferred into an appropriate E. coli host via a
technique called in vitro packaging (recombinant plasmids contained in
phage shells ) .
- they can also be packaged in phage capsids, which allows the foreign
genes to be transferred into or between cells by transduction (a process
resembling viral infection )
3
3- Plating & Growing & Selection & Isolation
- Colonies are formed in selective media , just as with a plasmid vector .
- The media is : Liquid media .
- So that the transformed cells can be identified by plating on a medium
containing the antibiotic ( Ampicillin Agar plate ).
- Those cells which did not take up the cosmid would be unable to grow.
Yeast artificial chromosome Vector
Telomers
AB Resistant Centromere
4
- Yeast artificial chromosome (YAC) is a human-engineered
DNA molecule used to clone DNA sequences in yeast cells.
- YAC is an artificially constructed chromosome that contains a
 Centromere :
 Telomeres :
• for maintenance and stabilization and protect ends from degradation
happened by enzymes .
 Autonomous replicating sequence (ARS)
• element required for replication and preservation of YAC
in yeast cells
 ARS elements are thought to act as replication origins
- Artificial chromosome that contains telomers , (center ) origin
of replication , a yeast centromere , and selectable marker (
Antibody resistance ) for identification in yeast cells.
- Host cell : Yeast cell ( Eukaryotic )
◘ A YAC is built using an initial circular plasmid
- typically broken into two linear molecules using restriction
enzymes
 DNA ligase is then used to ligate a sequence or gene of
interest between the two linear molecules
 forming a single large linear piece of DNA
5
Plant Vectors
1- Ti – plasmid ( 1ry vector )
2- plant vector ( 2ry vector )
6
◘ Ti – Plasmid
 Tumor inducing plasmids (Ti plasmid) are double stranded
circular DNA present in Agrobacterium tumefaciens.
 Agrobacterium is a Gram negative soil bacterium which
infects plants. ( Host cell : plant cell )
 Agrobacterium tumefaciens infects damaged plant tissues,
induces the formation of a plant tumor growth called crown
gall ( grown gall ) .
 Crown gall ( grown gall ) formation occurs when a fragment
of Ti plasmid, referred to as ( T-DNA ) is transferred from
the bacterium in to the host where it gets integrated in to the
plant cell chromosomes.
◘ Plant Vector : -
- The gene of interest integrate with the DNA of the plant ,
produce new traits for the plant using later in Genetic
engineering .
7

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Vectors for Cloning DNA: Cosmid, YAC, and Ti-Plasmid

  • 1. 1 Vectors ◘ we will taking about 3 Vectors in our lecture : - 1- Cosmid Vector . 2- Yeast artificial chromosome Vector . 3- Plant Vector . Cosmid Vector • A cosmid is a type of hybrid plasmid that contains a Lambda phage cos sequence, (cos sites + plasmid = cosmids) • Host cell : ( Bacteria ) Prokaryotic (E. coli host ) • DNA sequences are originally from the lambda phage. • They are often used as a cloning vector in genetic engineering • Cosmids can contain 44 k bp of DNA.
  • 2. 2 • They also contain a gene for selection such as antibiotic resistance, so that the transformed cells can be identified by plating on a medium containing the antibiotic. Those cells which did not take up the cosmid would be unable to grow. • They Have Multiple cloning site ( poly linker ) , and Origin of replication . • Extra-chromosomal circular DNA molecule . ◘ Cloning Steps :- 1- Preparation . - Target DNA: the genomic DNA to be cloned has to be cut into the appropriate size range of restriction fragments , By using Restriction Enzymes , And Cut the Cosmid Cloning site ( poly linker ) by the same Restriction enzyme , Then Ligation of physically unlinked fragments. 2- Packaging - the total DNA is transferred into an appropriate E. coli host via a technique called in vitro packaging (recombinant plasmids contained in phage shells ) . - they can also be packaged in phage capsids, which allows the foreign genes to be transferred into or between cells by transduction (a process resembling viral infection )
  • 3. 3 3- Plating & Growing & Selection & Isolation - Colonies are formed in selective media , just as with a plasmid vector . - The media is : Liquid media . - So that the transformed cells can be identified by plating on a medium containing the antibiotic ( Ampicillin Agar plate ). - Those cells which did not take up the cosmid would be unable to grow. Yeast artificial chromosome Vector Telomers AB Resistant Centromere
  • 4. 4 - Yeast artificial chromosome (YAC) is a human-engineered DNA molecule used to clone DNA sequences in yeast cells. - YAC is an artificially constructed chromosome that contains a  Centromere :  Telomeres : • for maintenance and stabilization and protect ends from degradation happened by enzymes .  Autonomous replicating sequence (ARS) • element required for replication and preservation of YAC in yeast cells  ARS elements are thought to act as replication origins - Artificial chromosome that contains telomers , (center ) origin of replication , a yeast centromere , and selectable marker ( Antibody resistance ) for identification in yeast cells. - Host cell : Yeast cell ( Eukaryotic ) ◘ A YAC is built using an initial circular plasmid - typically broken into two linear molecules using restriction enzymes  DNA ligase is then used to ligate a sequence or gene of interest between the two linear molecules  forming a single large linear piece of DNA
  • 5. 5 Plant Vectors 1- Ti – plasmid ( 1ry vector ) 2- plant vector ( 2ry vector )
  • 6. 6 ◘ Ti – Plasmid  Tumor inducing plasmids (Ti plasmid) are double stranded circular DNA present in Agrobacterium tumefaciens.  Agrobacterium is a Gram negative soil bacterium which infects plants. ( Host cell : plant cell )  Agrobacterium tumefaciens infects damaged plant tissues, induces the formation of a plant tumor growth called crown gall ( grown gall ) .  Crown gall ( grown gall ) formation occurs when a fragment of Ti plasmid, referred to as ( T-DNA ) is transferred from the bacterium in to the host where it gets integrated in to the plant cell chromosomes. ◘ Plant Vector : - - The gene of interest integrate with the DNA of the plant , produce new traits for the plant using later in Genetic engineering .
  • 7. 7