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Drug Design:   Discovery,   Development   and  Delivery Dr. Basavaraj K. Nanjwade  M.Pharm., Ph.D Associate Professor Department of Pharmaceutics KLE University BELGAUM – 590010 E-mail:  [email_address] Cell No: 0091 9448716277
Drug Design
Drug Design ,[object Object],[object Object],[object Object]
Drug Design ,[object Object],[object Object],[object Object]
Rational Drug Design ,[object Object],[object Object],[object Object],[object Object]
Rational Drug Design Refining the understanding of pathogenesis
Rational Drug Design Investigating complex systems increases knowledge return
Computer-assisted Drug Design (CADD) ,[object Object],[object Object]
Computer-assisted Drug Design (CADD) In CoMFA map the colored fields describe how molecular structure can be modified to increase biological activity  (CoMFA-Comparative molecular field analysis)
Computer-assisted Drug Design (CADD) ,[object Object],[object Object]
Computer-assisted Drug Design (CADD) 3D models of membrane receptors can be refined and validated in a realistic lipid-water-salt environment using molecular dynamics simulations
Computer-assisted Drug Design (CADD ) ,[object Object],[object Object],[object Object]
Computer-assisted Drug Design (CADD) New potent inhibitor for the Human Sirutuin Type 2 enzyme was found using a virtual screening technique
Neural network in Drug Design ,[object Object],[object Object],[object Object]
Applications ,[object Object],[object Object],[object Object],[object Object],[object Object]
Drug Discovery
Drug Discovery ,[object Object],[object Object]
Dermatology Inflammatory/ Immune-related Oncology/ Cancer Respiratory Cardiovascular/ Blood Disorder Musculoskeletal Infectious Disease Microbial/Viral Neurological/ Pyschotherapeutic Ophthalmic Metabolic Gastrointestinal Important DRUG Targets Focused Areas of Research
Drug Discovery Pathway Efficacy ADME Toxicology Safety Preformulations Stability Studies Leads Selection of candidate drug Preclinical Studies Primary Screening [Hits] Discovery & Development
[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],Drug Discovery Process
Drug Discovery Pipeline Validated Targets Hot  Leads Drug Candidates ADME PK Human Trials H-UHTS Primary Screening Secondary Screening Lead Identification Lead Optimization Pre-clinical Clinical Discovery Development M-HTS Lab & Animal Tests L-MTS Clinical Validation Genome Sequencing  SNP Discovery  Genotyping  Gene Expession Profiling  Exploratory  Research Genomics Proteomics Drug Discovery Fractionate Protein Mass Spec Combichem Synthesis Natural Compounds Compound Library  Pathway Mapping Protein Structure Functional  Genomics Protein- protein Interactions Protein Localization Expression Profiling Peptide Mass Fingerprinting Production Diagnostics
Drug Discovery Process Assay Development Discovery Center w/primary & secondary screening & Pre-ADME In vitro & in-vivo ADMET Compound library generation Combichem Clinical  Trials  & Clinical  monitoring Functional and ADMET screening assays becoming more important earlier in the screening process. Exploratory Drug Discovery Drug Development New Drug Target  Identification Target  Qualification Validation Lead  Identification Lead  Optimization Preclinical  Development Clinical  Development NDA
“ Real drug “pipeline ” Drug Targets A  –  Absorption Solubility Stability Dissolution Drug Transport D -  Distribution Plasma Protein Binding assays (PPB) “ Permeability” Drug Drug
Cell Membrane Transport Mechanisms Transcellular Paracellular Active Transport Active Efflux
[object Object],[object Object],[object Object],Membrane structure & transport
Ion channels are membrane spanning proteins
Opening and closing of channels requires conformational change
Extracellular Intracellular Flux of ions through the channels is passive
Drug Development
Drug Development ,[object Object]
Drug Discovery Pathway Efficacy ADME Toxicology Safety Preformulations Stability Studies Leads Selection of candidate drug Preclinical Studies Primary Screening [Hits] Discovery & Development
Drug Development Process
Reasons for Attrition in Drug  Development
Stomach pH2 Intestine pH3-8 PV Blood Kidneys Tissues Cell Target Stability Acidic buffer Stability Acidic enzymatic buffer Solubility pKa Stability CYP3A metabolic stability Permeability Passive  P-gp efflux Transportes Log D Liver Phase I and II Metabolic stability Metabolite ID Protein binding RBC uptake Stability Enzymatic Plasma stability Renal Extraction Log D Permeability Passive Transporters Log D Cell Exposure Barriers of  Drug Reaching Target
Candidate Selection: Building  “Developability” in Preclinical Profiling Lead (active molecule) Metabolism Selectivity Potency LO  (optimized molecule) Potency Selectivity Metabolism Physical properties Best leads Physical / chemical  properties Biopharmaceutics
Stability in Physiological Conditions Duodenum Stomach Ascending colon Descending colon Jejunum Ileum Small intestine Transverse  colon Rectum pH = 1 - 3.5 pH = 5 - 7 pH = 8 Blood = 7.4
Solubility, Permeability, Chemical and Metabolic Stability Affects Oral Bioavailability Solid Drug Drug in Solution Absorbed Drug Dissolution Membrane Transfer Solubility Permeability Systemic  Circulation Metabolism Liver Extraction Portal Vein
Physico-chemical profile of NCEs Permeability pKa Stability PPB Log D Polymorphism Lipophilicity Solubility Integrity Profile
Successful Drug = Activity + Property   Optimization Activity Pharmacology Property Pharmaceutical Profiling In vitro Solubility Permeability BBB & Pgp Log P & pKa Metabolism P450 Inhibition Stability Pharmacokinetics In vivo Enzyme  Receptor Cell-based assay In vitro Animal Model In vivo Redesign
Drug Development Process
Drug Delivery
Drug Delivery ,[object Object],[object Object]
Drug Delivery ,[object Object]
Drug Delivery ,[object Object],[object Object]
Drug  Delivery ,[object Object]
Context – Drug Delivery
Context – Drug Delivery
Drug Delivery - Markets
Drug Delivery Systems Nano Technology  DDS Buccal DDS Rectal DDS Vaginal DDS Pulmonary  DDS Nasal DDS Topical DDS Parentral  DDS Oral DDS Delivery Systems
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Drug Design:Discovery, Development and Delivery

  • 1. Drug Design: Discovery, Development and Delivery Dr. Basavaraj K. Nanjwade M.Pharm., Ph.D Associate Professor Department of Pharmaceutics KLE University BELGAUM – 590010 E-mail: [email_address] Cell No: 0091 9448716277
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  • 6. Rational Drug Design Refining the understanding of pathogenesis
  • 7. Rational Drug Design Investigating complex systems increases knowledge return
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  • 9. Computer-assisted Drug Design (CADD) In CoMFA map the colored fields describe how molecular structure can be modified to increase biological activity (CoMFA-Comparative molecular field analysis)
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  • 11. Computer-assisted Drug Design (CADD) 3D models of membrane receptors can be refined and validated in a realistic lipid-water-salt environment using molecular dynamics simulations
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  • 13. Computer-assisted Drug Design (CADD) New potent inhibitor for the Human Sirutuin Type 2 enzyme was found using a virtual screening technique
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  • 18. Dermatology Inflammatory/ Immune-related Oncology/ Cancer Respiratory Cardiovascular/ Blood Disorder Musculoskeletal Infectious Disease Microbial/Viral Neurological/ Pyschotherapeutic Ophthalmic Metabolic Gastrointestinal Important DRUG Targets Focused Areas of Research
  • 19. Drug Discovery Pathway Efficacy ADME Toxicology Safety Preformulations Stability Studies Leads Selection of candidate drug Preclinical Studies Primary Screening [Hits] Discovery & Development
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  • 21. Drug Discovery Pipeline Validated Targets Hot Leads Drug Candidates ADME PK Human Trials H-UHTS Primary Screening Secondary Screening Lead Identification Lead Optimization Pre-clinical Clinical Discovery Development M-HTS Lab & Animal Tests L-MTS Clinical Validation Genome Sequencing SNP Discovery Genotyping Gene Expession Profiling Exploratory Research Genomics Proteomics Drug Discovery Fractionate Protein Mass Spec Combichem Synthesis Natural Compounds Compound Library Pathway Mapping Protein Structure Functional Genomics Protein- protein Interactions Protein Localization Expression Profiling Peptide Mass Fingerprinting Production Diagnostics
  • 22. Drug Discovery Process Assay Development Discovery Center w/primary & secondary screening & Pre-ADME In vitro & in-vivo ADMET Compound library generation Combichem Clinical Trials & Clinical monitoring Functional and ADMET screening assays becoming more important earlier in the screening process. Exploratory Drug Discovery Drug Development New Drug Target Identification Target Qualification Validation Lead Identification Lead Optimization Preclinical Development Clinical Development NDA
  • 23. “ Real drug “pipeline ” Drug Targets A – Absorption Solubility Stability Dissolution Drug Transport D - Distribution Plasma Protein Binding assays (PPB) “ Permeability” Drug Drug
  • 24. Cell Membrane Transport Mechanisms Transcellular Paracellular Active Transport Active Efflux
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  • 26. Ion channels are membrane spanning proteins
  • 27. Opening and closing of channels requires conformational change
  • 28. Extracellular Intracellular Flux of ions through the channels is passive
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  • 31. Drug Discovery Pathway Efficacy ADME Toxicology Safety Preformulations Stability Studies Leads Selection of candidate drug Preclinical Studies Primary Screening [Hits] Discovery & Development
  • 33. Reasons for Attrition in Drug Development
  • 34. Stomach pH2 Intestine pH3-8 PV Blood Kidneys Tissues Cell Target Stability Acidic buffer Stability Acidic enzymatic buffer Solubility pKa Stability CYP3A metabolic stability Permeability Passive P-gp efflux Transportes Log D Liver Phase I and II Metabolic stability Metabolite ID Protein binding RBC uptake Stability Enzymatic Plasma stability Renal Extraction Log D Permeability Passive Transporters Log D Cell Exposure Barriers of Drug Reaching Target
  • 35. Candidate Selection: Building “Developability” in Preclinical Profiling Lead (active molecule) Metabolism Selectivity Potency LO (optimized molecule) Potency Selectivity Metabolism Physical properties Best leads Physical / chemical properties Biopharmaceutics
  • 36. Stability in Physiological Conditions Duodenum Stomach Ascending colon Descending colon Jejunum Ileum Small intestine Transverse colon Rectum pH = 1 - 3.5 pH = 5 - 7 pH = 8 Blood = 7.4
  • 37. Solubility, Permeability, Chemical and Metabolic Stability Affects Oral Bioavailability Solid Drug Drug in Solution Absorbed Drug Dissolution Membrane Transfer Solubility Permeability Systemic Circulation Metabolism Liver Extraction Portal Vein
  • 38. Physico-chemical profile of NCEs Permeability pKa Stability PPB Log D Polymorphism Lipophilicity Solubility Integrity Profile
  • 39. Successful Drug = Activity + Property Optimization Activity Pharmacology Property Pharmaceutical Profiling In vitro Solubility Permeability BBB & Pgp Log P & pKa Metabolism P450 Inhibition Stability Pharmacokinetics In vivo Enzyme Receptor Cell-based assay In vitro Animal Model In vivo Redesign
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  • 46. Context – Drug Delivery
  • 47. Context – Drug Delivery
  • 48. Drug Delivery - Markets
  • 49. Drug Delivery Systems Nano Technology DDS Buccal DDS Rectal DDS Vaginal DDS Pulmonary DDS Nasal DDS Topical DDS Parentral DDS Oral DDS Delivery Systems
  • 50. Thanx for your …..