Bruno Vieira

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I'm a PhD student in Bioinformatics and Population Genomics at the Queen Mary University of London (http://wurmlab.github.io) and also a Node.js Web Developer. Recently I became a Mozilla Science Lab fellow to build open science, open access, and open source practice throughout my networks (https://science.mozilla.org/blog/2016-science-fellows). I founded and lead the open source community project BioNode.io (modular and universal bioinformatics) and I'm a member of the Dat-data.com team (git for data). I'm involved in open source and open research and participate/organise workshops and hackathons. Previously, I worked for: * Geekli.st on the integration with the LinkedIn API * ESEB20...

bioinformatics reproducibility open source population genomics javascript biology web genome crowdsourcing data docker ruby web development gamification angular.js node.js annotation prediction gene

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Bruno Vieira

Présentations

Crowdsourcing genome annotation at #ccs14

Crowdsourcing gene predictions & estimating population sizes

AllBio and EU CodeFest 2014

Effective population size in insects

Building collaborative workflows for scientific data

J’aime

What is big data?

Joe parker-benchmarking-bioinformatics

There is No Intelligent Life Down Here

2015 12-18- Avoid having to retract your genomics analysis - Popgroup Reproducible research presentation

Making DevOps Secure with Docker on Solaris (Oracle Open World, with Jesse Butler)

Genome sharing projects around the world nijmegen oct 29 - 2015

2015 11-17-programming inr.key

Mozilla Science Lab 101

Containers, docker, and security: state of the union (Bay Area Infracoders Meetup)

13 questions you might have about galaxy

2015 10-7-11am-reproducible research

2015 9-30-sbc361-research methcomm

sparql,uniprot.org in production

2015 09-28 bio721 intro

2015 beacon-metagenome-tutorial

Taming Snakemake

Data Science London - Meetup, 28/05/15

Overcoming barriers for genomic data sharing yaac presentation may 23 2015

Immutable infrastructure with Docker and containers (GlueCon 2015)

ScalaItaly 2015 - Your Microservice as a Function

2015 pag-metagenome

BioPerl: The evolution of a Bioinformatics Toolkit

An introduction to workflow-based programming with Node-RED

Docker: automation for the rest of us

Streams for the Web

Dat 5 minute Lightning Talk

Why developing research software is like a startup (and why this matters)

What every successful open source project needs

Writing native bindings to node.js in C++

Petermrjisc20141201