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The Hyve Introduction
TRANSMART ANNUAL MEETING 2015
AMSTERDAM, OCTOBER 20, 2015
CEO, The Hyve
2
The Hyve
u  Professional	
  support	
  for	
  open	
  source	
  so0ware	
  for	
  bioinforma4cs	
  and	
  transla4onal	
  
research	
  so0ware,	
  such	
  as	
  tranSMART,	
  cBioPortal,	
  i2b2,	
  OHDSI,	
  Galaxy	
  and	
  ADAM	
  
	
  
	
  
	
  
	
  
	
  
	
  
Mission	
  
Enable	
  pre-­‐compe44ve	
  
collabora4on	
  
in	
  life	
  science	
  R&D	
  
by	
  leveraging	
  	
  
open	
  source	
  so,ware	
  
Core	
  values	
  
Share	
  	
  
	
  
	
  
Reuse	
  
	
  
	
  
Specialize	
  
Office	
  Loca5ons	
  
Utrecht,	
  Netherlands	
  
Cambridge,	
  MA,	
  United	
  States	
  
Services	
  
So0ware	
  development	
  
Data	
  science	
  services	
  
Consultancy	
  
Hos4ng	
  /	
  SLAs	
  
Fast-­‐growing	
  
Started	
  in	
  2012	
  
32	
  people	
  by	
  now	
  
Interdisciplinary team
so0ware	
   engineers,	
   data	
   scien4sts,	
   project	
   managers	
   &	
   staff;	
   exper4se	
   in	
  
bioinforma4cs,	
  medical	
  informa4cs,	
  so0ware	
  engineering,	
  biosta4s4cs	
  etc.	
  	
  
3
Share : Transparency
5
Open Source
u  Source code openly accessible and reusable for everyone
u  Enables pre-competitive collaboration: both academics and
industry can use and enhance it à leverage public funding
u  Transparency: verification (scientific as well as IT security) can be
done by anyone, no ‘black box’
Consumer market examples:
7
Why open source?
u  Leverage joint innovation power of academics, industry and SME’s
u  Leverage public funding from EU and NIH
u  Build a joint product roadmap and combine investments
u  Proven model: works very well in cloud computing (Linux, OpenStack),
in web development and for data science in general (R, Spark etc.)
u  Prerequisite: collaboration à community building
8
Open Source in Precision Medicine
Study
design:
Biobanking:
Scientific compute:
Data visualisation:
Workflow / NGS:
Datawarehousing:
Imaging:
Clinical - eCRF & apps:
The Hyve introduction TranSMART Annual Meeting 2015 Amsterdam

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The Hyve introduction TranSMART Annual Meeting 2015 Amsterdam

  • 1. The Hyve Introduction TRANSMART ANNUAL MEETING 2015 AMSTERDAM, OCTOBER 20, 2015 CEO, The Hyve
  • 2. 2 The Hyve u  Professional  support  for  open  source  so0ware  for  bioinforma4cs  and  transla4onal   research  so0ware,  such  as  tranSMART,  cBioPortal,  i2b2,  OHDSI,  Galaxy  and  ADAM               Mission   Enable  pre-­‐compe44ve   collabora4on   in  life  science  R&D   by  leveraging     open  source  so,ware   Core  values   Share         Reuse       Specialize   Office  Loca5ons   Utrecht,  Netherlands   Cambridge,  MA,  United  States   Services   So0ware  development   Data  science  services   Consultancy   Hos4ng  /  SLAs   Fast-­‐growing   Started  in  2012   32  people  by  now  
  • 3. Interdisciplinary team so0ware   engineers,   data   scien4sts,   project   managers   &   staff;   exper4se   in   bioinforma4cs,  medical  informa4cs,  so0ware  engineering,  biosta4s4cs  etc.     3
  • 5. 5
  • 6. Open Source u  Source code openly accessible and reusable for everyone u  Enables pre-competitive collaboration: both academics and industry can use and enhance it à leverage public funding u  Transparency: verification (scientific as well as IT security) can be done by anyone, no ‘black box’ Consumer market examples:
  • 7. 7 Why open source? u  Leverage joint innovation power of academics, industry and SME’s u  Leverage public funding from EU and NIH u  Build a joint product roadmap and combine investments u  Proven model: works very well in cloud computing (Linux, OpenStack), in web development and for data science in general (R, Spark etc.) u  Prerequisite: collaboration à community building
  • 8. 8 Open Source in Precision Medicine Study design: Biobanking: Scientific compute: Data visualisation: Workflow / NGS: Datawarehousing: Imaging: Clinical - eCRF & apps: