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공간정보(GIS) 기반의
MULTI-NATIONAL
MORTALITY DATA 및 다변량
데이터 탐색적 분석 기법
Namkug Kim, PhD
Medical Imaging & Robotics Lab.
Dept. of Convergence Medicine/Radiology
University of Ulsan College of Medicine
Asan Medical Center
South Korea
Arterial Oxygen Saturation in Tibetan and
Han Infants bone in Lhasa
4NEJM, 1995
Suicide vs Altitude
5
Utah/Statistical claims/Suicide rate among Mormons, 2007
Suicide vs Altitude
High attitude
sickness or Mild
Hypoxia
↑ Depression
↑ Suicide
Why? Any Brain
Metabolites
change?
Kim N, et al, AJP, 2011 Jan.
Boston
(sea level)
Salt lake city
(1280m)
• Schema
• Age Adjusted Suicide Rate (CDC Wonder)
• Unemployment Rate (90-08)
• Averaging 90-98
• Historical Comparability of Local Area Unemployment
Statistics (LAUS) Data by Bureau of Labor Statistics
• Mean altitude
• Arc-GIS from County Boundary (US Census,
NASA STRM)
• Latitude/Longitude
• Arc-GIS from County Boundary
• Population Density / County Area (sqrt miles)
• 1990-98 from CDC Wonder/ Arc-GIS from County
Boundary (US Census, NASA STRM)
• Per capita income (1969-2007)
• Averaging 90-98
• Bureau of Economic Analysis
• Gun Ownership
• State basis
• Behavioral Risk Factor Surveillance System (BRFSS).
7
1999-2001 Definition: Figure D1. ALABAMA
8J Addict Med 2012;6: 166–171
9
10Geospatial Health, 2014 Nov., In Press
Mortality Micro-data : USA
USA : CDC
Wide-ranging Online Data for Epidemiologic
Research
Birth, Environment, Mortality, Population, …
Mortality Data (68-11)
Online/Offline
Schema
– Month of Death/Sex/Race/Age*/Date/Marital status/Hispanic
origin/Education/….
– Address(FIPS)* : ZIP, Census, County, State
– GIS (530 counties, 1982-1988 )
» Altitude/ Latitude / Longitude
– Cause of Death (ICD-9/10)**
11*Address Screening **Age adjust
Area Resource File (ARF), etc
U.S. Department of Health and Human Services
Health Resources and Services Administration
ASCII file, 2010 103MB
12
Mortality Micro-data : Others
Korea
통계청
사망원인통계 Raw 데이터 CD 판매 (98~13)
국가통계포털 : 국내통계, 지역 통계로 Access(http://kosis.kr)
– 250 counties (Si, Gun, Gu)
– County (Si, Gun, Gu) based 50 causes of death (2005~2013)
Japan
E-Stat, Portal Site of Official Statistics of Japan, http://www.e-
stat.go.jp/
System of Social and Demographic Statistics(SSDS) ,
Statistics Bureau, Ministry of Internal Affairs and Communications
Swiss
Swiss Federal Statistical Office FSO
Since 1969
Chile
Instituto Nacional de Estadisticas
Italy
CDC EPI Info Data
92 counties
20 provinces
China
Suicide rates in China, 1995—99 Lancet 2002
Woman suicide
14
Chile
05
1015
SuicideRate
-100 0 100 200 300
Min Altitude(m)
Suicide_rate Fitted values
Italy
Elevation Data : DEM
15
DEM + County Boundary
Alaska : USGS DEM + County
Boundary
SWISS, STRM 90m
Korea/Japan, STRM 90m, Boundary
Italy 94 counties
USA maps
Magnetic anomaly maps
Bouguer gravity anomaly map
Aeroradiometric map : Radioactivity and Gamma-ray Exposure
potassium percentage, uranium and thorium ppm
National Geochemical map
Climate
Rainfall, daylight, humidity, Solar radiation, …
Geology map
Magnetic anomaly mapsSelenium maps
Solar radiation map
0 2 4 6 8 10 12
0
500
1000
1500
2000
Month
TotalSuicideNumber
Monthly Suicide in Korea
0 2 4 6 8 10 12
200
400
600
800
1000
Month
TotalSuicideNumber/Year
2000~2008 Monthly Suicide in Korea
0 2 4 6 8 10 12
50
100
150
200
250
300
Month
SuicideNumber/Day
2000~2008 Monthly Suicide in Korea
2000
2001
2002
2003
2004
2005
2006
2007
2008
Total
Male
Female
Total
Male
Female
0 50 100 150 200 250 300 350 400
0
10
20
30
40
50
60
70
80
90
100
Day
SuicideNumber
Daily Suicide in Korea
Suicide Num/day
AhnDate
ChoiDate
0 10 20 30 40 50 60
0
100
200
300
400
500
600
Day
SuicideNumber
Weekly Suicide in Korea
Suicide Num/week
choiweek
ahnweek
WeekDay
Copycat; actress Choi Jinshil, 2008/10/2
Day Model
Regression
rsquare: 0.7005
adjrsquare: 0.6971
Week Model
Regression
rsquare: 0.9405
adjrsquare: 0.9351
0 10 20 30 40 50 60 70 80 90
-10
0
10
20
30
40
50
60
0 2 4 6 8 10 12 14
0
50
100
150
200
250
300
Week
Day
Copycat; Actress Lee Eunjoo, 2005/2/22
0 50 100 150 200 250 300 350 400
0
10
20
30
40
50
60
70
Day
SuicideNumber
Daily Suicide in Korea
Suicide Num/day
LeeDate
0 10 20 30 40 50 60
0
50
100
150
200
250
300
350
Week
SuicideNumber
Weekly Suicide in Korea
Suicide Num/week
leeweek
Copycat; Businessman
JeongMongHun,2003/8/4
0 50 100 150 200 250 300 350 400
0
10
20
30
40
50
60
70
Day
SuicideNumber
Daily Suicide in Korea
Suicide Num/day
mongdate
0 10 20 30 40 50 60
0
50
100
150
200
250
300
350
Day
SuicideNumber
Weekly Suicide in Korea
Suicide Num/week
mongweek
Spatial-Temporal Analysis
27
Suicide rate / 100,000, Regional
31Depress Res Treat. 2011
31P MRS1H MRS
Mild Hypoxia Animal Exp.
-Controlled study 모델 : Mild Hypoxia vs Normal controls
-저산소증 동물 모형 : 산소 농도 10%, Baseline, 1주, 2주, 3주 followup scan
-MRS SVS scan 부위 : parietal, pons, prefrontal, thalamus
Metabolite Water NAA Cr Cho Lactate
Parietal 1.391E6 2.031 3.072 3.348 2.66
Pons 1.074E6 2.015 3.088 3.125 2.69
Prefrontal 1.145E6 2.057 3.832 3.752 2.16
Thalamus 1.262E6 2.215 2.954 3.112 2.52
32
Acknowledgements
• MIRL, Dept. of Radiology, Asan Medical Center
– Director : JoonBeom Seo(MD,PhD), Namkug Kim (PhD), Sangmin Lee (MD) , Donghyun Yang (MD)
– Postdoc research fellow:, Dongjin Han (PhD), Yongjun Chang (PhD), Daekwan Kim (PhD), Anjan Kumar Paul
(PhD)
– Researcher : Jangpyo Bae (PhDc) , Minho Lee (PhDc), Joonho Jung (PhDc), Jongsoo Kim (BS), Kyesam Jung
(MS), Taekjin Jang (BS)
– Research Nurse : Junghye Kang
– Radiographer : Jooyoung Park, Youngsin Kim, Heejun Park, Songyi Baek, Koeun Lee, Eunjin Park, Haekang
Kim
– Management : Seongsuk Kim, Sunhee Lee, Dajung Kim, Hyunjung Ahn,
• Clinical Collaborators, Asan Medical Center
– Radiology : Joon beom Seo, Sangmin Lee, Donghyun Yang, Hyungjin Won, Seungsoo Lee, Joohee Cha,
Hyuckjae Choi, Sangjoon Kim, Hosung Kim, Deokhee Lee, Hyunwoo Goo, Jinsung Lee, Heungkyu Ko, Dongil
Kwon, Junghwan Baek
– Neurology :Dongwha Kang, Chongsik Lee, Jaehong Lee, Sangbeom Jun, Misun Kwon, Beomjun Kim
– Cardiology ; Younghak Kim, Jongmin Song
• Related Companies

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공간정보(Gis) 기반의 multi national mortality data 및 다변량 데이터 탐색적 분석 기법

  • 1. 공간정보(GIS) 기반의 MULTI-NATIONAL MORTALITY DATA 및 다변량 데이터 탐색적 분석 기법 Namkug Kim, PhD Medical Imaging & Robotics Lab. Dept. of Convergence Medicine/Radiology University of Ulsan College of Medicine Asan Medical Center South Korea
  • 2. Arterial Oxygen Saturation in Tibetan and Han Infants bone in Lhasa 4NEJM, 1995
  • 3. Suicide vs Altitude 5 Utah/Statistical claims/Suicide rate among Mormons, 2007
  • 4. Suicide vs Altitude High attitude sickness or Mild Hypoxia ↑ Depression ↑ Suicide Why? Any Brain Metabolites change? Kim N, et al, AJP, 2011 Jan. Boston (sea level) Salt lake city (1280m) • Schema • Age Adjusted Suicide Rate (CDC Wonder) • Unemployment Rate (90-08) • Averaging 90-98 • Historical Comparability of Local Area Unemployment Statistics (LAUS) Data by Bureau of Labor Statistics • Mean altitude • Arc-GIS from County Boundary (US Census, NASA STRM) • Latitude/Longitude • Arc-GIS from County Boundary • Population Density / County Area (sqrt miles) • 1990-98 from CDC Wonder/ Arc-GIS from County Boundary (US Census, NASA STRM) • Per capita income (1969-2007) • Averaging 90-98 • Bureau of Economic Analysis • Gun Ownership • State basis • Behavioral Risk Factor Surveillance System (BRFSS).
  • 6. 8J Addict Med 2012;6: 166–171
  • 7. 9
  • 8. 10Geospatial Health, 2014 Nov., In Press
  • 9. Mortality Micro-data : USA USA : CDC Wide-ranging Online Data for Epidemiologic Research Birth, Environment, Mortality, Population, … Mortality Data (68-11) Online/Offline Schema – Month of Death/Sex/Race/Age*/Date/Marital status/Hispanic origin/Education/…. – Address(FIPS)* : ZIP, Census, County, State – GIS (530 counties, 1982-1988 ) » Altitude/ Latitude / Longitude – Cause of Death (ICD-9/10)** 11*Address Screening **Age adjust
  • 10. Area Resource File (ARF), etc U.S. Department of Health and Human Services Health Resources and Services Administration ASCII file, 2010 103MB 12
  • 11. Mortality Micro-data : Others Korea 통계청 사망원인통계 Raw 데이터 CD 판매 (98~13) 국가통계포털 : 국내통계, 지역 통계로 Access(http://kosis.kr) – 250 counties (Si, Gun, Gu) – County (Si, Gun, Gu) based 50 causes of death (2005~2013) Japan E-Stat, Portal Site of Official Statistics of Japan, http://www.e- stat.go.jp/ System of Social and Demographic Statistics(SSDS) , Statistics Bureau, Ministry of Internal Affairs and Communications Swiss Swiss Federal Statistical Office FSO Since 1969 Chile Instituto Nacional de Estadisticas Italy CDC EPI Info Data 92 counties 20 provinces China Suicide rates in China, 1995—99 Lancet 2002 Woman suicide 14 Chile 05 1015 SuicideRate -100 0 100 200 300 Min Altitude(m) Suicide_rate Fitted values Italy
  • 13. DEM + County Boundary Alaska : USGS DEM + County Boundary SWISS, STRM 90m Korea/Japan, STRM 90m, Boundary Italy 94 counties
  • 14. USA maps Magnetic anomaly maps Bouguer gravity anomaly map Aeroradiometric map : Radioactivity and Gamma-ray Exposure potassium percentage, uranium and thorium ppm National Geochemical map Climate Rainfall, daylight, humidity, Solar radiation, … Geology map Magnetic anomaly mapsSelenium maps Solar radiation map
  • 15. 0 2 4 6 8 10 12 0 500 1000 1500 2000 Month TotalSuicideNumber Monthly Suicide in Korea 0 2 4 6 8 10 12 200 400 600 800 1000 Month TotalSuicideNumber/Year 2000~2008 Monthly Suicide in Korea 0 2 4 6 8 10 12 50 100 150 200 250 300 Month SuicideNumber/Day 2000~2008 Monthly Suicide in Korea 2000 2001 2002 2003 2004 2005 2006 2007 2008 Total Male Female Total Male Female 0 50 100 150 200 250 300 350 400 0 10 20 30 40 50 60 70 80 90 100 Day SuicideNumber Daily Suicide in Korea Suicide Num/day AhnDate ChoiDate 0 10 20 30 40 50 60 0 100 200 300 400 500 600 Day SuicideNumber Weekly Suicide in Korea Suicide Num/week choiweek ahnweek WeekDay
  • 16. Copycat; actress Choi Jinshil, 2008/10/2 Day Model Regression rsquare: 0.7005 adjrsquare: 0.6971 Week Model Regression rsquare: 0.9405 adjrsquare: 0.9351 0 10 20 30 40 50 60 70 80 90 -10 0 10 20 30 40 50 60 0 2 4 6 8 10 12 14 0 50 100 150 200 250 300 Week Day
  • 17. Copycat; Actress Lee Eunjoo, 2005/2/22 0 50 100 150 200 250 300 350 400 0 10 20 30 40 50 60 70 Day SuicideNumber Daily Suicide in Korea Suicide Num/day LeeDate 0 10 20 30 40 50 60 0 50 100 150 200 250 300 350 Week SuicideNumber Weekly Suicide in Korea Suicide Num/week leeweek
  • 18. Copycat; Businessman JeongMongHun,2003/8/4 0 50 100 150 200 250 300 350 400 0 10 20 30 40 50 60 70 Day SuicideNumber Daily Suicide in Korea Suicide Num/day mongdate 0 10 20 30 40 50 60 0 50 100 150 200 250 300 350 Day SuicideNumber Weekly Suicide in Korea Suicide Num/week mongweek
  • 20. 31Depress Res Treat. 2011 31P MRS1H MRS
  • 21. Mild Hypoxia Animal Exp. -Controlled study 모델 : Mild Hypoxia vs Normal controls -저산소증 동물 모형 : 산소 농도 10%, Baseline, 1주, 2주, 3주 followup scan -MRS SVS scan 부위 : parietal, pons, prefrontal, thalamus Metabolite Water NAA Cr Cho Lactate Parietal 1.391E6 2.031 3.072 3.348 2.66 Pons 1.074E6 2.015 3.088 3.125 2.69 Prefrontal 1.145E6 2.057 3.832 3.752 2.16 Thalamus 1.262E6 2.215 2.954 3.112 2.52 32
  • 22. Acknowledgements • MIRL, Dept. of Radiology, Asan Medical Center – Director : JoonBeom Seo(MD,PhD), Namkug Kim (PhD), Sangmin Lee (MD) , Donghyun Yang (MD) – Postdoc research fellow:, Dongjin Han (PhD), Yongjun Chang (PhD), Daekwan Kim (PhD), Anjan Kumar Paul (PhD) – Researcher : Jangpyo Bae (PhDc) , Minho Lee (PhDc), Joonho Jung (PhDc), Jongsoo Kim (BS), Kyesam Jung (MS), Taekjin Jang (BS) – Research Nurse : Junghye Kang – Radiographer : Jooyoung Park, Youngsin Kim, Heejun Park, Songyi Baek, Koeun Lee, Eunjin Park, Haekang Kim – Management : Seongsuk Kim, Sunhee Lee, Dajung Kim, Hyunjung Ahn, • Clinical Collaborators, Asan Medical Center – Radiology : Joon beom Seo, Sangmin Lee, Donghyun Yang, Hyungjin Won, Seungsoo Lee, Joohee Cha, Hyuckjae Choi, Sangjoon Kim, Hosung Kim, Deokhee Lee, Hyunwoo Goo, Jinsung Lee, Heungkyu Ko, Dongil Kwon, Junghwan Baek – Neurology :Dongwha Kang, Chongsik Lee, Jaehong Lee, Sangbeom Jun, Misun Kwon, Beomjun Kim – Cardiology ; Younghak Kim, Jongmin Song • Related Companies